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scnpilot_solids2_trim150_scaffold_110_curated

Search features with annotation key words

Displaying items 31-60 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_110_curated_31
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34502..35347
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00036C83CB
Uncharacterized protein {ECO:0000313|EMBL:KHJ56078.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
Putative integral membrane protein
scnpilot_solids2_trim150_scaffold_110_curated_32
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35787..36017)
DNA (231bp) protein (77aa)
CopG family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI0003723F3C
antitoxin protein
Antitoxin protein {ECO:0000313|EMBL:AGS25849.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
scnpilot_solids2_trim150_scaffold_110_curated_33
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36118..36909)
DNA (792bp) protein (264aa)
ATPase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C13A9
Chaperone required for the assembly of F1-ATPase {ECO:0000313|EMBL:ETA72962.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
ATP12 ATPase
scnpilot_solids2_trim150_scaffold_110_curated_34
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36970..37959)
DNA (990bp) protein (330aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
RluA family pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
pseudouridine synthase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FEAF18
scnpilot_solids2_trim150_scaffold_110_curated_35
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38447..40222
DNA (1776bp) protein (592aa)
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA {ECO:0000256|HAMAP-Rule:MF_01728}; EC=3.6.3.42 {ECO:0000256|HAMAP-Rule:MF_01728};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=NDVA_RHILO
cyclic beta-1,2-glucan ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
scnpilot_solids2_trim150_scaffold_110_curated_36
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40275..41354)
DNA (1080bp) protein (360aa)
tartrate dehydrogenase; K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Tartrate dehydrogenase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0K4D4_RHILT
Tartrate dehydrogenase {ECO:0000313|EMBL:EJC71989.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
scnpilot_solids2_trim150_scaffold_110_curated_37
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41369..42268)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F6N0_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCV07561.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_110_curated_38
unknown

Not on your lists

42404..42589
DNA (186bp) protein (62aa)
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_39
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42926..43063
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT05_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX59109.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_40
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43295..44293
DNA (999bp) protein (333aa)
AraC family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003631B31
AraC family transcriptional regulator {ECO:0000313|EMBL:ESZ20485.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_110_curated_41
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44321..45106)
DNA (786bp) protein (262aa)
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT07_9RHIZ
ABC transporter {ECO:0000313|EMBL:EHK56155.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_110_curated_42
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45103..45879)
DNA (777bp) protein (259aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KPG2_MESAW
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:AGB45993.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_110_curated_43
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45944..46876)
DNA (933bp) protein (311aa)
UPI0003CFBBF7 related cluster n=1 Tax=unknown RepID=UPI0003CFBBF7
NMT1/THI5 like domain protein {ECO:0000313|EMBL:CDX29471.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
NMT1/THI5 like domain-containing protein
scnpilot_solids2_trim150_scaffold_110_curated_44
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46992..47804)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT10_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56158.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_45
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47930..48364)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PNW9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42762.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_46
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48552..49229
DNA (678bp) protein (226aa)
PadR family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3T7_9RHIZ
PadR family transcriptional regulator {ECO:0000313|EMBL:EHH13605.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_110_curated_47
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49257..49553
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI00036A6086
Uncharacterized protein {ECO:0000313|EMBL:EJN12296.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; K09956 hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_48
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49561..50883)
DNA (1323bp) protein (441aa)
MFS transporter {ECO:0000313|EMBL:ETX08132.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Major facilitator superfamily protein id=4761798 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
major facilitator superfamily permease
scnpilot_solids2_trim150_scaffold_110_curated_49
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51092..52396
DNA (1305bp) protein (435aa)
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11); K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=520454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus bv. 6 str. 870.;"
Nicotinate phosphoribosyltransferase n=201 Tax=Brucella RepID=PNCB_BRUA1
scnpilot_solids2_trim150_scaffold_110_curated_50
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52398..53198)
DNA (801bp) protein (267aa)
Myo-inositol catabolism IolB domain-containing protein; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-]
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKD3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12425.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
scnpilot_solids2_trim150_scaffold_110_curated_51
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53203..53421)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F0P6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX27286.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_52
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53452..54366)
DNA (915bp) protein (305aa)
xylose isomerase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036809FD
Xylose isomerase {ECO:0000313|EMBL:ESX82713.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
sugar phosphate isomerase/epimerase
scnpilot_solids2_trim150_scaffold_110_curated_53
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54532..56382)
DNA (1851bp) protein (617aa)
Putative malonic semialdehyde oxidative decarboxylase {ECO:0000313|EMBL:CDX21257.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDX21257.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
thiamine pyrophosphate protein central region; K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C87C4
scnpilot_solids2_trim150_scaffold_110_curated_54
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56414..58351)
DNA (1938bp) protein (646aa)
hypothetical protein; K03338 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
5-dehydro-2-deoxygluconokinase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037ED557
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:ESY62179.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
scnpilot_solids2_trim150_scaffold_110_curated_55
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58452..59309)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367E5BE
RpiR family transcriptional regulator {ECO:0000313|EMBL:KKB13054.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_56
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59551..60666
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKC2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58842.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
dehydrogenase/oxidoreductase
scnpilot_solids2_trim150_scaffold_110_curated_57
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60693..61490)
DNA (798bp) protein (266aa)
UPI0003CE4892 related cluster n=1 Tax=unknown RepID=UPI0003CE4892
Short-chain dehydrogenase {ECO:0000313|EMBL:ESY01304.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_110_curated_58
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61487..62491)
DNA (1005bp) protein (335aa)
oxidoreductase domain-containing protein (EC:1.1.1.18); K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
Putative dehydrogenase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VEY2_9RHIZ
Putative dehydrogenase {ECO:0000313|EMBL:EJN04517.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
scnpilot_solids2_trim150_scaffold_110_curated_59
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62558..63391)
DNA (834bp) protein (278aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC-type sugar transport system, ATPase component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9XCV9_RHILT
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:KFC64841.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_110_curated_60
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63391..64536)
DNA (1146bp) protein (382aa)
Putative Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component n=11 Tax=Vibrio nigripulchritudo RepID=U4JZ46_9VIBR
ATPase {ECO:0000313|EMBL:KJV10247.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
putative Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
Displaying items 31-60 of 108 in total

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