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scnpilot_solids2_trim150_scaffold_110_curated

Search features with annotation key words

Displaying items 91-108 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_110_curated_91
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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96521..97150
DNA (630bp) protein (210aa)
Membrane protein, MarC family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQN8_MESAW
membrane protein, MarC family
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_110_curated_92
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(97175..100072)
DNA (2898bp) protein (966aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQS0_9RHIZ
scnpilot_solids2_trim150_scaffold_110_curated_93
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(100181..100558)
DNA (378bp) protein (126aa)
Phospholipid-binding protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CDA0_9RHIZ
PEBP family protein {ECO:0000313|EMBL:EUB96474.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_94
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(100617..101309)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000360502B
Uncharacterized protein {ECO:0000313|EMBL:CCV14351.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein; K09991 hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_95
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(101497..102885)
DNA (1389bp) protein (463aa)
Outer membrane efflux protein bepC n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAU9_9RHIZ
Outer membrane efflux protein bepC {ECO:0000313|EMBL:CCV14352.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
type I secretion outer membrane protein, TolC family; K12340 outer membrane channel protein
scnpilot_solids2_trim150_scaffold_110_curated_96
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(103086..103754)
DNA (669bp) protein (223aa)
protein-L-isoaspartate(D-aspartate)O-methyltrans ferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJ34_9RHIZ
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:ESX74216.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
scnpilot_solids2_trim150_scaffold_110_curated_97
unknown

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comp(103914..104642)
DNA (729bp) protein (243aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_110_curated_98
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(104800..106476)
DNA (1677bp) protein (559aa)
Resolvase domain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ98_XANP2
Putative resolvase domain-containing protein {ECO:0000313|EMBL:KGJ64288.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
resolvase domain-containing protein
scnpilot_solids2_trim150_scaffold_110_curated_99
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(106498..106743)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJT0_RHOPH
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
scnpilot_solids2_trim150_scaffold_110_curated_100
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107036..107338
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FKH4_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
scnpilot_solids2_trim150_scaffold_110_curated_101
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107335..107766
DNA (432bp) protein (144aa)
Ribonuclease VapC n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WAC3_RHILT
stbB; Plasmid stability protein StbB, putative; K07062
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
scnpilot_solids2_trim150_scaffold_110_curated_102
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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107914..108732
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9S4_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77838.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_110_curated_103
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108729..110714
DNA (1986bp) protein (662aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F5B63F
NTPase KAP {ECO:0000313|EMBL:KDR86532.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
KAP P-loop domain-containing protein
scnpilot_solids2_trim150_scaffold_110_curated_104
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110714..111616
DNA (903bp) protein (301aa)
Uncharacterized protein {ECO:0000313|EMBL:KDR86533.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
Putative uncharacterized protein id=4014240 bin=GWF2_Geobacter_54_21 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_105
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111613..112983
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031A84C2
Uncharacterized protein {ECO:0000313|EMBL:KFI26338.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_106
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112980..113735
DNA (756bp) protein (252aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031246D6
Hydrolase TatD {ECO:0000313|EMBL:KFI26339.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
scnpilot_solids2_trim150_scaffold_110_curated_107
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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113926..114867
DNA (942bp) protein (314aa)
Antirestriction protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B849_9RHIZ
antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:AGK59804.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_110_curated_108
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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114867..115304
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4H0_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ETR79040.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
Displaying items 91-108 of 108 in total

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