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scnpilot_solids2_trim150_scaffold_110_curated

Search features with annotation key words

Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_110_curated_61
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64638..65594)
DNA (957bp) protein (319aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NN33_9RHOB
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM33448.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
periplasmic-binding protein/LacI transcriptional regulator; K02058 simple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_110_curated_62
unknown

Not on your lists

comp(65829..66158)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_110_curated_63
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66369..67370
DNA (1002bp) protein (334aa)
alkane 1-monooxygenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D64957
Alkane 1-monooxygenase {ECO:0000313|EMBL:ERI16440.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
luciferase family protein
scnpilot_solids2_trim150_scaffold_110_curated_64
unknown

Not on your lists

67494..67919
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_110_curated_65
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67938..68765)
DNA (828bp) protein (276aa)
Amidohydrolase 2 n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXQ2_9RHIZ
Putative metal-dependent hydrolase of the TIM-barrel fold protein {ECO:0000313|EMBL:EDQ35703.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
amidohydrolase; K07046
scnpilot_solids2_trim150_scaffold_110_curated_66
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68976..70001)
DNA (1026bp) protein (342aa)
D-threo-aldose 1-dehydrogenase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GBY1_9RHIZ
D-threo-aldose 1-dehydrogenase {ECO:0000313|EMBL:ESW69036.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_110_curated_67
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70161..71693
DNA (1533bp) protein (511aa)
Galactarate dehydratase {ECO:0000313|EMBL:KFB10812.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KFB10812.1};; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
D-galactarate dehydratase/Altronate hydrolase domain-containing protein (EC:4.2.1.42); K01685 altronate hydrolase [EC:4.2.1.7]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A941A
scnpilot_solids2_trim150_scaffold_110_curated_68
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71700..72503
DNA (804bp) protein (268aa)
hypothetical protein; K01470 creatinine amidohydrolase [EC:3.5.2.10]
UPI0003CFD0F8 related cluster n=1 Tax=unknown RepID=UPI0003CFD0F8
Creatininase {ECO:0000313|EMBL:ESZ25259.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
scnpilot_solids2_trim150_scaffold_110_curated_69
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72544..73335)
DNA (792bp) protein (264aa)
type 11 methyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI000299D699
Methyltransferase type 11 {ECO:0000313|EMBL:KIF81372.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_110_curated_70
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73385..73873)
DNA (489bp) protein (163aa)
Nodulation protein N n=1 Tax=Ahrensia sp. R2A130 RepID=E0MTK7_9RHOB
Nodulation protein N {ECO:0000313|EMBL:EFL87704.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
acyl dehydratase
scnpilot_solids2_trim150_scaffold_110_curated_71
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73870..75567)
DNA (1698bp) protein (566aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
PREDICTED: 4-coumarate--CoA ligase-like 9-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15E28
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:AAZ62354.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
scnpilot_solids2_trim150_scaffold_110_curated_72
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76295..80104
DNA (3810bp) protein (1270aa)
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:EHK56509.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EHK56509.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRY5_9RHIZ
scnpilot_solids2_trim150_scaffold_110_curated_73
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80270..80581)
DNA (312bp) protein (104aa)
UPI0003CE9E4B related cluster n=1 Tax=unknown RepID=UPI0003CE9E4B
DNA methyltransferase {ECO:0000313|EMBL:ESW92819.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_74
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80949..82157)
DNA (1209bp) protein (403aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D5CB9D
Transporter protein {ECO:0000313|EMBL:EHK56094.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_110_curated_75
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82376..83248)
DNA (873bp) protein (291aa)
Putative glutathione S-transferase YghU n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRZ0_9RHIZ
Putative glutathione S-transferase YghU {ECO:0000313|EMBL:EHK56514.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative glutathione S-transferase YghU; K11209 GST-like protein
scnpilot_solids2_trim150_scaffold_110_curated_76
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83434..84420)
DNA (987bp) protein (329aa)
Lysozyme (EC:3.2.1.17)
UPI0003CE0F3C related cluster n=1 Tax=unknown RepID=UPI0003CE0F3C
Muramidase {ECO:0000313|EMBL:ESY83027.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
scnpilot_solids2_trim150_scaffold_110_curated_77
unknown

Not on your lists

comp(84660..84863)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_110_curated_78
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85123..85665
DNA (543bp) protein (181aa)
MerR family transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030A4336
MerR family transcriptional regulator {ECO:0000313|EMBL:EXL09796.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_79
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85673..86866)
DNA (1194bp) protein (398aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M960_9RHIZ
tRNA-guanine transglycosylase, queuosine-34-forming
scnpilot_solids2_trim150_scaffold_110_curated_80
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87027..88106)
DNA (1080bp) protein (360aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F3C264
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
scnpilot_solids2_trim150_scaffold_110_curated_81
unknown

Not on your lists

comp(88103..88693)
DNA (591bp) protein (197aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_110_curated_82
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88706..89215)
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
PREDICTED: peptidyl-prolyl cis-trans isomerase cyp15-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C194CB
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
scnpilot_solids2_trim150_scaffold_110_curated_83
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89237..89827)
DNA (591bp) protein (197aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
PREDICTED: peptidyl-prolyl cis-trans isomerase-like 2-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15EC3
cyclophilin type peptidyl-prolyl cis-trans isomerase
scnpilot_solids2_trim150_scaffold_110_curated_84
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89862..90371)
DNA (510bp) protein (170aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=4 Tax=Mesorhizobium RepID=V7F2S6_9RHIZ
scnpilot_solids2_trim150_scaffold_110_curated_85
unknown

Not on your lists

90582..91238
DNA (657bp) protein (219aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_110_curated_86
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91353..91967)
DNA (615bp) protein (205aa)
Lysine exporter protein LysE/YggA n=1 Tax=Nitratireductor indicus C115 RepID=K2N8E2_9RHIZ
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ABG62797.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_110_curated_87
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92147..92584
DNA (438bp) protein (146aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6JF14_9RHOB
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EJW13420.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
signal transduction protein
scnpilot_solids2_trim150_scaffold_110_curated_88
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92796..92930
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVH3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55321.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_110_curated_89
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(92973..95729)
DNA (2757bp) protein (919aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F5B2_9RHIZ
scnpilot_solids2_trim150_scaffold_110_curated_90
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96051..96458
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AST3_RHILS
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 61-90 of 108 in total

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