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scnpilot_solids2_trim150_scaffold_1_curated

Search features with annotation key words

Displaying items 61-90 of 463 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1_curated_61
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60877..62118)
DNA (1242bp) protein (414aa)
phosphopentomutase; K01839 phosphopentomutase [EC:5.4.2.7]
Phosphopentomutase {ECO:0000255|HAMAP-Rule:MF_00740}; EC=5.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00740};; Phosphodeoxyribomutase {ECO:0000255|HAMAP-Rule:MF_00740}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
phosphopentomutase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F97DC
scnpilot_solids2_trim150_scaffold_1_curated_62
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62201..62818)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBV1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10792.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_63
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62860..63435)
DNA (576bp) protein (192aa)
pilus assembly protein TadE n=1 Tax=Rhizobium loti RepID=UPI00037B3B67
TadE-like family protein {ECO:0000313|EMBL:AID27844.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
TadE family protein
scnpilot_solids2_trim150_scaffold_1_curated_64
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63598..64038)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLS0_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESZ26361.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
scnpilot_solids2_trim150_scaffold_1_curated_65
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64357..64536
DNA (180bp) protein (60aa)
UPI0003CE8453 related cluster n=1 Tax=unknown RepID=UPI0003CE8453
Fimbrial protein {ECO:0000313|EMBL:ESX48373.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA
scnpilot_solids2_trim150_scaffold_1_curated_66
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64703..65224
DNA (522bp) protein (174aa)
type IV prepilin peptidase, cpaA; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
peptidase n=1 Tax=Rhizobium loti RepID=UPI000381C405
Type IV leader peptidase family protein {ECO:0000313|EMBL:AID27848.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
scnpilot_solids2_trim150_scaffold_1_curated_67
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65417..66229
DNA (813bp) protein (271aa)
Pilus assembly protein CpaB n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FM44_9RHIZ
Pilus assembly protein CpaB {ECO:0000313|EMBL:CCV15579.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB
scnpilot_solids2_trim150_scaffold_1_curated_68
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66253..67758
DNA (1506bp) protein (502aa)
pilus assembly protein CpaC n=1 Tax=Hoeflea sp. 108 RepID=UPI0003705BB9
Pilus assembly protein CpaC {ECO:0000313|EMBL:ESY92576.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
exporter protein, cpaC; K02280 pilus assembly protein CpaC
scnpilot_solids2_trim150_scaffold_1_curated_69
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67774..68508
DNA (735bp) protein (245aa)
pilus assembly protein cpaD n=1 Tax=Rhizobium loti RepID=UPI0003730EF3
Pilus biogenesis lipoprotein CpaD {ECO:0000313|EMBL:CDX15400.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
pilus assembly protein cpaD; K02281 pilus assembly protein CpaD
scnpilot_solids2_trim150_scaffold_1_curated_70
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68548..69837
DNA (1290bp) protein (430aa)
UPI0003CEB965 related cluster n=1 Tax=unknown RepID=UPI0003CEB965
Response regulator receiver protein {ECO:0000313|EMBL:CDX22806.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
response regulator receiver protein; K02282 pilus assembly protein CpaE
scnpilot_solids2_trim150_scaffold_1_curated_71
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69916..71385
DNA (1470bp) protein (490aa)
Secretory protein kinase, cpaF n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJS7_9RHIZ
Secretory protein kinase, cpaF {ECO:0000313|EMBL:EHK58990.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
secretory protein kinase, cpaF; K02283 pilus assembly protein CpaF
scnpilot_solids2_trim150_scaffold_1_curated_72
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71415..72428
DNA (1014bp) protein (338aa)
Mlr5603 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BF3_RHILO
hypothetical protein; K12510 tight adherence protein B
Pilus assembly protein {ECO:0000313|EMBL:ESY84941.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
scnpilot_solids2_trim150_scaffold_1_curated_73
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72441..73463
DNA (1023bp) protein (341aa)
Type II secretion system protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HPD5_9RHIZ
Type II secretion system protein {ECO:0000313|EMBL:ESZ13377.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
Type II secretion system F domain-containing protein; K12511 tight adherence protein C
scnpilot_solids2_trim150_scaffold_1_curated_74
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73592..74410)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FGV6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV15571.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_75
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74544..75920
DNA (1377bp) protein (459aa)
Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
peptidase M17 leucyl aminopeptidase domain-containing protein; K01255 leucyl aminopeptidase [EC:3.4.11.1]
UPI0003CFDF29 related cluster n=1 Tax=unknown RepID=UPI0003CFDF29
scnpilot_solids2_trim150_scaffold_1_curated_76
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75997..76347
DNA (351bp) protein (117aa)
UPI0003CE940B related cluster n=1 Tax=unknown RepID=UPI0003CE940B
MarR family transcriptional regulator {ECO:0000313|EMBL:ESW85701.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1_curated_77
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76344..77204
DNA (861bp) protein (287aa)
NLP/P60 protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9Y7_MESOW
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AEH90986.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids2_trim150_scaffold_1_curated_78
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77210..78151)
DNA (942bp) protein (314aa)
Glyoxylate/hydroxypyruvate reductase A {ECO:0000313|EMBL:CDX50690.1}; EC=1.1.1.79 {ECO:0000313|EMBL:CDX50690.1};; EC=1.1.1.81 {ECO:0000313|EMBL:CDX50690.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
2-hydroxyacid dehydrogenase n=2 Tax=Mesorhizobium RepID=V7GJG3_9RHIZ
phosphoglycerate dehydrogenase-like oxidoreductase
scnpilot_solids2_trim150_scaffold_1_curated_79
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78266..79897)
DNA (1632bp) protein (544aa)
Peptide ABC transporter, ATP-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJR8_9RHIZ
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZQ14806.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ABC-type uncharacterized transport system, duplicated ATPase component
scnpilot_solids2_trim150_scaffold_1_curated_80
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79894..80214)
DNA (321bp) protein (107aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED6811
putative pilT protein, N-terminal, putative toxin of TAS system
scnpilot_solids2_trim150_scaffold_1_curated_81
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80274..80522)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DBE5EF
Rv0623-like transcription factor
Rv0623-like transcription factor {ECO:0000313|EMBL:ABE38683.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
scnpilot_solids2_trim150_scaffold_1_curated_82
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80572..81723)
DNA (1152bp) protein (384aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PB01_9RHIZ
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EKF44321.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
binding-protein-dependent transport system inner membrane protein; K13895 microcin C transport system permease protein
scnpilot_solids2_trim150_scaffold_1_curated_83
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81723..82826)
DNA (1104bp) protein (368aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI0003646A07
Microcin ABC transporter permease {ECO:0000313|EMBL:EXL08684.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ABC-type uncharacterized transport system, permease component
scnpilot_solids2_trim150_scaffold_1_curated_84
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82866..84734)
DNA (1869bp) protein (623aa)
UPI0003CF5A46 related cluster n=1 Tax=unknown RepID=UPI0003CF5A46
Uncharacterized protein {ECO:0000313|EMBL:ESZ00227.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
ABC-type oligopeptide transport system, periplasmic component
scnpilot_solids2_trim150_scaffold_1_curated_85
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84734..86677)
DNA (1944bp) protein (648aa)
Peptide ABC transporter, periplasmic peptide-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJR4_9RHIZ
Peptide ABC transporter, periplasmic peptide-binding protein {ECO:0000313|EMBL:EHK58977.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
extracellular solute-binding protein; K13893 microcin C transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_86
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86850..87632)
DNA (783bp) protein (261aa)
Cytochrome c, class I n=1 Tax=Nitratireductor indicus C115 RepID=K2PT79_9RHIZ
Cytochrome c homolog {ECO:0000313|EMBL:CDX36850.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cytochrome c, class I; K08738 cytochrome c
scnpilot_solids2_trim150_scaffold_1_curated_87
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87841..88581
DNA (741bp) protein (247aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
UPI0003CEA110 related cluster n=1 Tax=unknown RepID=UPI0003CEA110
scnpilot_solids2_trim150_scaffold_1_curated_88
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88585..89451
DNA (867bp) protein (289aa)
Prephenate dehydratase {ECO:0000313|EMBL:EKF19488.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EKF19488.1};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N5M1_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_89
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89515..90456)
DNA (942bp) protein (314aa)
NUDIX hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DA381E
NUDIX hydrolase {ECO:0000313|EMBL:CDX15635.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
scnpilot_solids2_trim150_scaffold_1_curated_90
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90480..90911)
DNA (432bp) protein (144aa)
Histidine triad (HIT) protein n=3 Tax=Mesorhizobium RepID=V7F8P4_9RHIZ
Histidine triad (HIT) protein {ECO:0000313|EMBL:ESX59375.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
histidine triad (HIT) protein
Displaying items 61-90 of 463 in total

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