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scnpilot_solids2_trim150_scaffold_1_curated

Search features with annotation key words

Displaying items 121-150 of 463 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1_curated_121
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121022..122542
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368BE20
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY39020.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative ABC transporter ATP-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_122
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122554..123591
DNA (1038bp) protein (346aa)
Putative ABC transporter (Permease protein) ribose transport system n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0THI0_9BRAD
Putative ABC transporter (Permease protein) ribose transport system {ECO:0000313|EMBL:CCE05918.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
putative ABC transporter
scnpilot_solids2_trim150_scaffold_1_curated_123
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123575..124615
DNA (1041bp) protein (347aa)
LacI family transcriptional regulator (EC:5.1.1.1); K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F3A89
Transcriptional regulator {ECO:0000313|EMBL:EJN00118.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
scnpilot_solids2_trim150_scaffold_1_curated_124
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124680..125957
DNA (1278bp) protein (426aa)
Cytosine deaminase CodA {ECO:0000313|EMBL:EYR81498.1}; EC=3.5.4.1 {ECO:0000313|EMBL:EYR81498.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cytosine deaminase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E0E223
cytosine deaminase-like metal-dependent hydrolase
scnpilot_solids2_trim150_scaffold_1_curated_125
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125967..126728)
DNA (762bp) protein (254aa)
Mlr5633 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BC9_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX33864.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_126
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126695..127345)
DNA (651bp) protein (217aa)
Repressor protein CI n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EFV8_9RHIZ
Repressor protein CI {ECO:0000313|EMBL:CCV03170.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_1_curated_127
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127426..127980)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N7K6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20088.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_128
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128181..130403)
DNA (2223bp) protein (741aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3S0_9RHIZ
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EHK52378.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_1_curated_129
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130422..131630)
DNA (1209bp) protein (403aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EHK52377.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EHK52377.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3R9_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_130
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131659..132312)
DNA (654bp) protein (218aa)
Glutathione S-transferase {ECO:0000313|EMBL:AKI02316.1}; EC=2.5.1.18 {ECO:0000313|EMBL:AKI02316.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
PREDICTED: glutathione S-transferase D3-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A069
scnpilot_solids2_trim150_scaffold_1_curated_131
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132339..133508)
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037614B0
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAB52038.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_1_curated_132
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133537..135333)
DNA (1797bp) protein (599aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3R7_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHK52375.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_1_curated_133
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135514..135972)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E4136D
MerR family transcriptional regulator {ECO:0000313|EMBL:EXL09431.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
transcription regulator MerR DNA binding protein
scnpilot_solids2_trim150_scaffold_1_curated_134
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136421..140068
DNA (3648bp) protein (1216aa)
UPI0003CE7B59 related cluster n=1 Tax=unknown RepID=UPI0003CE7B59
Peptidoglycan-binding protein {ECO:0000313|EMBL:ESY81411.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
peptidoglycan-binding domain 1 protein; K13582 localization factor PodJL
scnpilot_solids2_trim150_scaffold_1_curated_135
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140297..141181
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11ME4_MESSB
hypothetical protein; K07090
Permease {ECO:0000313|EMBL:KFB11218.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
scnpilot_solids2_trim150_scaffold_1_curated_136
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141184..141975
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EFX1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV03180.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_137
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142000..142689)
DNA (690bp) protein (230aa)
Metallophosphatase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G2J9_9RHIZ
Metallophosphatase {ECO:0000313|EMBL:EZQ13619.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
metallophosphoesterase; K06953
scnpilot_solids2_trim150_scaffold_1_curated_138
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142686..145079)
DNA (2394bp) protein (798aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/H associated n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11ME1_MESSB
DEAD/H associated {ECO:0000313|EMBL:ABG61434.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_1_curated_139
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145336..146346
DNA (1011bp) protein (337aa)
UPI0003CFDC7F related cluster n=1 Tax=unknown RepID=UPI0003CFDC7F
Uncharacterized protein {ECO:0000313|EMBL:CDX26158.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein; K07577 putative mRNA 3-end processing factor
scnpilot_solids2_trim150_scaffold_1_curated_140
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146346..147944
DNA (1599bp) protein (533aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:EHK52384.1}; EC=6.5.1.1 {ECO:0000313|EMBL:EHK52384.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3Q7_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_141
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148098..148613)
DNA (516bp) protein (172aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=1 Tax=Rhizobium sp. CF142 RepID=J2LDC3_9RHIZ
DNA-binding protein {ECO:0000313|EMBL:KGD86523.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
ferritin
scnpilot_solids2_trim150_scaffold_1_curated_142
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148696..149730)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037338C4
Dipeptide transport ATP-binding protein DppF {ECO:0000313|EMBL:ESR24151.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
oligopeptide/dipeptide ABC transporter ATPase; K12372 dipeptide transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_143
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149727..150725)
DNA (999bp) protein (333aa)
Dipeptide transport ATP-binding protein DppD n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QWM4_9RHIZ
Dipeptide transport ATP-binding protein DppD {ECO:0000313|EMBL:ESR24152.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
dppDch1; dipeptide ABC transporter; K12371 dipeptide transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_144
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150730..151659)
DNA (930bp) protein (310aa)
Peptide ABC transporter n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JDJ7_9DELT
Peptide ABC transporter {ECO:0000313|EMBL:ESQ12589.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;" source="uncultured Desulfofustis sp. PB-SRB1.;"
dppC1; ABC transporter permease; K12370 dipeptide transport system permease protein
scnpilot_solids2_trim150_scaffold_1_curated_145
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151649..152659)
DNA (1011bp) protein (337aa)
peptide ABC transporter permease n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A19683
alkaline phosphatase; K12369 dipeptide transport system permease protein
Peptide ABC transporter permease {ECO:0000313|EMBL:EXL08334.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
scnpilot_solids2_trim150_scaffold_1_curated_146
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152754..154346)
DNA (1593bp) protein (531aa)
Dipeptide-binding ABC transporter, periplasmic substrate-binding component n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLN1_9RHIZ
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJY47962.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
peptide ABC transporter substrate-binding protein; K12368 dipeptide transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_147
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154501..155052
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PSY5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF44207.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_148
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155055..155765)
DNA (711bp) protein (237aa)
phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
HAD-superfamily hydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I454_9RHIZ
HAD-superfamily hydrolase {ECO:0000313|EMBL:EHK52240.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_1_curated_149
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155768..157414)
DNA (1647bp) protein (549aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
Glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
UPI0003CE0293 related cluster n=1 Tax=unknown RepID=UPI0003CE0293
scnpilot_solids2_trim150_scaffold_1_curated_150
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157646..159139
DNA (1494bp) protein (498aa)
2-aminoadipate aminotransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E80227
GntR family transcription regulator {ECO:0000313|EMBL:EHK52420.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase
Displaying items 121-150 of 463 in total

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