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scnpilot_solids2_trim150_scaffold_1_curated

Search features with annotation key words

Displaying items 151-180 of 463 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1_curated_151
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159298..160893
DNA (1596bp) protein (532aa)
trimethylamine methyltransferase MttB; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
Trimethylamine methyltransferase MttB n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3P2_9RHIZ
Trimethylamine methyltransferase MttB {ECO:0000313|EMBL:EHK52419.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_1_curated_152
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160962..162038
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036845C5
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU50595.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids2_trim150_scaffold_1_curated_153
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162035..163219)
DNA (1185bp) protein (395aa)
acyl-CoA dehydrogenase n=1 Tax=Nocardiopsis kunsanensis RepID=UPI00034A8A13
putative acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:AFR09589.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
scnpilot_solids2_trim150_scaffold_1_curated_154
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163541..163993
DNA (453bp) protein (151aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BXU4_9RHIZ
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:KFB11252.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
carbon monoxide dehydrogenase subunit G
scnpilot_solids2_trim150_scaffold_1_curated_155
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164020..164616
DNA (597bp) protein (199aa)
biphenyl-2,3-diol 1,2-dioxygenase III (EC:1.13.11.39)
Biphenyl-2,3-diol 1,2-dioxygenase III n=1 Tax=Bacillus megaterium (strain ATCC 12872 / QMB1551) RepID=D5E3I3_BACMQ
Uncharacterized protein {ECO:0000313|EMBL:KGB83309.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
scnpilot_solids2_trim150_scaffold_1_curated_156
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164677..165468)
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EKF44214.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EKF44214.1};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Enoyl-CoA hydratase/short chain enoyl-CoA hydratase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Enoyl-CoA hydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2P283_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_157
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165562..166746)
DNA (1185bp) protein (395aa)
ATPase-like, ParA/MinD n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3N5_9RHIZ
ATPase-like, ParA/MinD {ECO:0000313|EMBL:EHK52412.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ATP/GTP-binding-like protein; K03593 ATP-binding protein involved in chromosome partitioning
scnpilot_solids2_trim150_scaffold_1_curated_158
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166987..167472
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F3Y9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGQ19827.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_159
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(167481..167831)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FXI2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CDN53124.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_160
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168093..169760)
DNA (1668bp) protein (556aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
lysK; lysyl-tRNA synthetase; K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6]
UPI0003CEEAE2 related cluster n=1 Tax=unknown RepID=UPI0003CEEAE2
scnpilot_solids2_trim150_scaffold_1_curated_161
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169900..170313
DNA (414bp) protein (138aa)
Mlr5635 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BC7_RHILO
hypothetical protein
Mlr5635 protein {ECO:0000313|EMBL:BAB52045.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_1_curated_162
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170321..171199
DNA (879bp) protein (293aa)
Sterol desaturase-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N7W7_9RHIZ
Sterol desaturase-like protein {ECO:0000313|EMBL:EKF20143.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Sterol desaturase
scnpilot_solids2_trim150_scaffold_1_curated_163
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171138..172022)
DNA (885bp) protein (295aa)
amino acid ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003736725
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CCV14736.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
family 3 extracellular solute-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_164
unknown

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comp(172034..172171)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_165
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172255..173877
DNA (1623bp) protein (541aa)
Glycosyl transferase family protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C449_9RHIZ
Glycosyl transferase family protein {ECO:0000313|EMBL:EIM76601.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_1_curated_166
unknown

Not on your lists

comp(174028..174219)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_167
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174346..174528)
DNA (183bp) protein (61aa)
UPI0003CEE84F related cluster n=1 Tax=unknown RepID=UPI0003CEE84F
Uncharacterized protein {ECO:0000313|EMBL:ESY70098.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
Protein of unknown function (DUF3606)
scnpilot_solids2_trim150_scaffold_1_curated_168
unknown

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comp(174834..175310)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_169
unknown

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comp(175307..175639)
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_170
unknown

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comp(175676..175960)
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_171
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176072..176314
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H0Y2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ06482.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1_curated_172
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176606..177670)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRQ5_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24123.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
scnpilot_solids2_trim150_scaffold_1_curated_173
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178094..178744)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11H54_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63271.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_1_curated_174
unknown

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comp(179736..180002)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_175
unknown

Not on your lists

comp(179999..180211)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_176
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180208..180639)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIR8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84244.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_177
unknown

Not on your lists

comp(180629..180889)
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_178
unknown

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comp(180892..181260)
DNA (369bp) protein (123aa)
UPI0003D02488 related cluster n=1 Tax=unknown RepID=UPI0003D02488
scnpilot_solids2_trim150_scaffold_1_curated_179
unknown

Not on your lists

181290..181613
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_180
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181593..183839)
DNA (2247bp) protein (749aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002559005
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ33922.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
hypothetical protein
Displaying items 151-180 of 463 in total

View Taxonomy