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scnpilot_solids2_trim150_scaffold_1_curated

Search features with annotation key words

Displaying items 211-240 of 463 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1_curated_211
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212226..212492)
DNA (267bp) protein (89aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003172403
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS13132.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_1_curated_212
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212768..213604
DNA (837bp) protein (279aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM35542.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Ion transport protein id=4348966 bin=GWF2_Lentisphaerae_57_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_213
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213614..214699)
DNA (1086bp) protein (362aa)
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:EXL08652.1}; EC=3.5.4.13 {ECO:0000313|EMBL:EXL08652.1};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
2-deoxycytidine 5-triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13]
2-deoxycytidine 5-triphosphate deaminase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y8T8_MESOW
scnpilot_solids2_trim150_scaffold_1_curated_214
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214902..216089
DNA (1188bp) protein (396aa)
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:CDX33921.1}; EC=2.5.1.- {ECO:0000313|EMBL:CDX33921.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
O-succinylhomoserine sulfhydrylase (EC:2.5.1.-)
O-succinylhomoserine sulfhydrylase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KS24_MESAW
scnpilot_solids2_trim150_scaffold_1_curated_215
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216091..216696)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPQ6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57281.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
CDP-alcohol phosphatidyltransferase
scnpilot_solids2_trim150_scaffold_1_curated_216
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216850..217242
DNA (393bp) protein (131aa)
magnesium transporter ApaG n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DF23A0
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
ApaG domain-containing protein; K06195 ApaG protein
scnpilot_solids2_trim150_scaffold_1_curated_217
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217348..218007
DNA (660bp) protein (220aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRY3_MESAW
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AGB48202.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_1_curated_218
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218021..221506)
DNA (3486bp) protein (1162aa)
Two-component sensor histidine kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPS8_9RHIZ
Two-component sensor histidine kinase {ECO:0000313|EMBL:EHK57261.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ATPase domain-containing protein
scnpilot_solids2_trim150_scaffold_1_curated_219
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

221755..222180
DNA (426bp) protein (142aa)
Large-conductance mechanosensitive channel n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TUA0_9RHIZ
mscL; large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
scnpilot_solids2_trim150_scaffold_1_curated_220
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222289..222681
DNA (393bp) protein (131aa)
4-oxalocrotonate tautomerase n=1 Tax=Dyella ginsengisoli RepID=UPI000349478A
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AJW47445.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
4-oxalocrotonate tautomerase
scnpilot_solids2_trim150_scaffold_1_curated_221
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222694..223854
DNA (1161bp) protein (387aa)
Aspartate aminotransferase {ECO:0000313|EMBL:EHK57263.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EHK57263.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPT0_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_222
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(223858..225135)
DNA (1278bp) protein (426aa)
5-aminolevulinate synthase; K00643 5-aminolevulinate synthase [EC:2.3.1.37]
5-aminolevulinate synthase {ECO:0000313|EMBL:EXL07251.1}; EC=2.3.1.37 {ECO:0000313|EMBL:EXL07251.1};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
5-aminolevulinate synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D3FE1
scnpilot_solids2_trim150_scaffold_1_curated_223
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225255..226202)
DNA (948bp) protein (316aa)
Putative ribose ABC transporter, permease n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3E5_9RHIZ
Putative ribose ABC transporter, permease {ECO:0000313|EMBL:CCV10708.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_1_curated_224
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226203..227180)
DNA (978bp) protein (326aa)
UPI0003CEE1AF related cluster n=1 Tax=unknown RepID=UPI0003CEE1AF
ABC transporter permease {ECO:0000313|EMBL:ESY67086.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_1_curated_225
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227182..228651)
DNA (1470bp) protein (490aa)
Putative ribose transport ATP-binding protein (RbsA) {ECO:0000313|EMBL:CCV10706.1}; EC=3.6.3.25 {ECO:0000313|EMBL:CCV10706.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Putative ribose transport ATP-binding protein (RbsA) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F310_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_226
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228700..229713)
DNA (1014bp) protein (338aa)
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FCP0_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX67259.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
D-ribose substrate-binding protein; K02058 simple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_227
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229835..230716)
DNA (882bp) protein (294aa)
gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17]
Gluconolactonase {ECO:0000313|EMBL:ADV10230.1}; EC=3.1.1.17 {ECO:0000313|EMBL:ADV10230.1};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Gluconolactonase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJX3_MESCW
scnpilot_solids2_trim150_scaffold_1_curated_228
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230722..230913)
DNA (192bp) protein (64aa)
4-oxalocrotonate tautomerase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6W6_9RHIZ
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:EHH12526.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
uncharacterized protein, 4-oxalocrotonate tautomerase
scnpilot_solids2_trim150_scaffold_1_curated_229
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231044..231787)
DNA (744bp) protein (248aa)
Response regulator receiver n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6W5_9RHIZ
Response regulator receiver {ECO:0000313|EMBL:CDX25663.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
response regulator receiver
scnpilot_solids2_trim150_scaffold_1_curated_230
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231787..233046)
DNA (1260bp) protein (420aa)
ATP-binding region ATPase domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJX0_MESCW
ATPase domain-containing protein
ATPase {ECO:0000313|EMBL:ESZ26190.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
scnpilot_solids2_trim150_scaffold_1_curated_231
bacterium YEK0313, Bacteria

Not on your lists

comp(233087..233866)
DNA (780bp) protein (260aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
Hydroxypyruvate isomerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMC7_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_232
bacterium YEK0313, Bacteria

Not on your lists

comp(233863..234501)
DNA (639bp) protein (213aa)
L-fuculose phosphate aldolase (EC:4.1.2.17)
Putative class II aldolase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIN1_9RHIZ
L-fuculose phosphate aldolase {ECO:0000313|EMBL:CEJ15104.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_1_curated_233
bacterium YEK0313, Bacteria

Not on your lists

comp(234507..235763)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFC7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ15103.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Hrp-dependent type III effector protein
scnpilot_solids2_trim150_scaffold_1_curated_234
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235767..236756)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000381886A
NAD-dependent epimerase {ECO:0000313|EMBL:KJB94528.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
NAD-dependent epimerase/dehydratase
scnpilot_solids2_trim150_scaffold_1_curated_235
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236779..238722)
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BF1C8
Uncharacterized protein {ECO:0000313|EMBL:KHJ56429.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_236
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238719..239621)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368E004
Sugar ABC transporter permease {ECO:0000313|EMBL:KHJ56430.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
ABC transporter permease; K10440 ribose transport system permease protein
scnpilot_solids2_trim150_scaffold_1_curated_237
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(239717..241618)
DNA (1902bp) protein (634aa)
putative ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003654512
ABC transporter {ECO:0000313|EMBL:KHJ56431.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
scnpilot_solids2_trim150_scaffold_1_curated_238
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241679..242662)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C38E0
Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHJ56432.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
ribose ABC transporter substrate-binding protein; K02058 simple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_239
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242730..243485)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037AA76F
GntR family transcriptional regulator {ECO:0000313|EMBL:KHJ56433.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1_curated_240
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243726..245096)
DNA (1371bp) protein (457aa)
hypothetical protein; K15785 L-2,4-diaminobutyrate transaminase [EC:2.6.1.-]
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MQP4_9RHIZ
Aminotransferase {ECO:0000313|EMBL:KDB03872.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
Displaying items 211-240 of 463 in total

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