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scnpilot_solids2_trim150_scaffold_103_curated

Search features with annotation key words

Displaying items 61-90 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_103_curated_61
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77434..77874
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003662A35
Uncharacterized protein {ECO:0000313|EMBL:AIF49460.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_62
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77914..78639
DNA (726bp) protein (242aa)
Putative polysaccharide deacetylase protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UF17_XANAP
polysaccharide deacetylase
Putative polysaccharide deacetylase protein {ECO:0000313|EMBL:CBA16774.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
scnpilot_solids2_trim150_scaffold_103_curated_63
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78793..80607)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH59_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98800.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_64
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80703..81134
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D3BF2
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids2_trim150_scaffold_103_curated_65
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81137..82006)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYW4_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:KGI77820.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_66
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82085..83080
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
tRNA-dihydrouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE92_9GAMM
tRNA-U16,U17-dihydrouridine synthase
scnpilot_solids2_trim150_scaffold_103_curated_67
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83194..83520
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45715.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_68
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83520..84212
DNA (693bp) protein (231aa)
transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI0003007667
Transcriptional regulator {ECO:0000313|EMBL:GAN45714.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_solids2_trim150_scaffold_103_curated_69
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84309..85712
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS1_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_103_curated_70
unknown

Not on your lists

comp(85737..86123)
DNA (387bp) protein (129aa)
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_71
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86143..87180
DNA (1038bp) protein (346aa)
Biotin-(Acetyl-CoA-carboxylase) ligase BirA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE86_9GAMM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin operon repressor {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
birA, biotin-(acetyl-CoA-carboxylase) ligase
scnpilot_solids2_trim150_scaffold_103_curated_72
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87177..87959
DNA (783bp) protein (261aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Type III pantothenate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE85_9GAMM
pantothenate kinase, type III
scnpilot_solids2_trim150_scaffold_103_curated_73
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87967..88620
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CCCB2
Sporulation protein {ECO:0000313|EMBL:GAN45711.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
sporulation related protein
scnpilot_solids2_trim150_scaffold_103_curated_74
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88904..90124
DNA (1221bp) protein (407aa)
Integrase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L3M3_FRAAD
Integrase
Integrase {ECO:0000313|EMBL:AFC87392.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
scnpilot_solids2_trim150_scaffold_103_curated_75
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90442..91629)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFL0_9GAMM
Protein of unknown function (DUF3296)
Uncharacterized protein {ECO:0000313|EMBL:AGG89700.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_103_curated_76
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93255..94238)
DNA (984bp) protein (328aa)
ISPsy2, transposase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN3_9GAMM
Transposase {ECO:0000313|EMBL:EIL87729.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ISXo1 transposase, IS5 family
scnpilot_solids2_trim150_scaffold_103_curated_77
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94360..96228
DNA (1869bp) protein (623aa)
ATP-dependent endonuclease family protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS10_ACIAC
ATP-dependent endonuclease family protein {ECO:0000313|EMBL:BAO29703.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
ATP-dependent endonuclease family protein
scnpilot_solids2_trim150_scaffold_103_curated_78
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96236..98047
DNA (1812bp) protein (604aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
UvrD/REP helicase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS11_ACIAC
scnpilot_solids2_trim150_scaffold_103_curated_79
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98406..99362
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2J4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93685.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_80
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99549..100523
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2J6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93687.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_81
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100535..101425
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2J7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93688.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_82
unknown

Not on your lists

101440..101535
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_103_curated_83
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101697..101888
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DL2_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47069.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
scnpilot_solids2_trim150_scaffold_103_curated_84
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101897..104152
DNA (2256bp) protein (752aa)
Stem cell self-renewal protein Piwi domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH92_ACIET
Uncharacterized protein {ECO:0000313|EMBL:KGE06224.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
stem cell self-renewal protein piwi domain-containing protein
scnpilot_solids2_trim150_scaffold_103_curated_85
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104140..105393
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH93_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM32798.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids2_trim150_scaffold_103_curated_86
Dickeya solani, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105564..105824)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000380EE71
Irep {ECO:0000313|EMBL:ERO59166.1}; TaxID=1231725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani D s0432-1.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_103_curated_87
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106256..107818
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1F9Q3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT05715.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria IOP40-10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_88
unknown

Not on your lists

108005..108217
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI0003607417
scnpilot_solids2_trim150_scaffold_103_curated_89
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108322..113262
DNA (4941bp) protein (1647aa)
Helicase domain protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G569_RALS8
helicase domain-containing protein
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_solids2_trim150_scaffold_103_curated_90
unknown

Not on your lists

113349..113525
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying items 61-90 of 188 in total

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