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scnpilot_solids2_trim150_scaffold_103_curated

Search features with annotation key words

Displaying items 1-30 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_103_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2559
DNA (2559bp) protein (853aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB0_9GAMM
outer membrane cobalamin receptor protein
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AGG90558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_103_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2641..4479
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE22_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97713.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sulfotransferase family protein
scnpilot_solids2_trim150_scaffold_103_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4481..6139
DNA (1659bp) protein (553aa)
Sulfotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI1_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG88310.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_103_curated_4
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6188..6742
DNA (555bp) protein (185aa)
Prolyl 4-hydroxylase subunit alpha n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=J9Y9A9_ALTMA
prolyl 4-hydroxylase subunit alpha
Prolyl 4-hydroxylase subunit alpha {ECO:0000313|EMBL:AFT73755.1}; TaxID=1004788 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii (strain English Channel 673).;"
scnpilot_solids2_trim150_scaffold_103_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6766..8298)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037EC0CD
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG90556.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_103_curated_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8304..9890)
DNA (1587bp) protein (529aa)
Sulfotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE20_9GAMM
Sulfotransferase {ECO:0000313|EMBL:GAN45724.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
tetratricopeptide repeat protein,sulfotransferase family protein
scnpilot_solids2_trim150_scaffold_103_curated_7

Not on your lists

10136..11761
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036699AC
TPR repeat protein {ECO:0000313|EMBL:EQD38086.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sulfotransferase family protein
scnpilot_solids2_trim150_scaffold_103_curated_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11915..13351
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036699AC
Sulfotransferase {ECO:0000313|EMBL:GAN45778.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
sulfotransferase family protein
scnpilot_solids2_trim150_scaffold_103_curated_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13543..14967)
DNA (1425bp) protein (475aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
adenosylhomocysteinase; K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VXG1_9GAMM
scnpilot_solids2_trim150_scaffold_103_curated_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15290..18013
DNA (2724bp) protein (908aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTT1_9GAMM
scnpilot_solids2_trim150_scaffold_103_curated_11
unknown

Not on your lists

comp(18084..18575)
DNA (492bp) protein (164aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_103_curated_12
unknown

Not on your lists

comp(18908..19399)
DNA (492bp) protein (164aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_103_curated_13
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19604..20836)
DNA (1233bp) protein (411aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthetase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B2E51A
scnpilot_solids2_trim150_scaffold_103_curated_14
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21112..23106)
DNA (1995bp) protein (665aa)
Diguanylate cyclase n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R6M0_KANKD
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACV25536.1}; Flags: Precursor;; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;"
scnpilot_solids2_trim150_scaffold_103_curated_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23365..24351)
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
tRNA-dihydrouridine synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPU5_9GAMM
tRNA-U20-dihydrouridine synthase
scnpilot_solids2_trim150_scaffold_103_curated_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24425..26299
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00035E025B
Diguanylate cyclase {ECO:0000313|EMBL:EIL98938.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
diguanylate cyclase
scnpilot_solids2_trim150_scaffold_103_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26250..26726)
DNA (477bp) protein (159aa)
Globin n=1 Tax=Rhodanobacter denitrificans RepID=I4WME8_9GAMM
truncated hemoglobin
Truncated hemoglobin {ECO:0000313|EMBL:AGG87715.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_103_curated_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26846..27217
DNA (372bp) protein (124aa)
Ferredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WME6_9GAMM
ferredoxin
Ferredoxin {ECO:0000313|EMBL:EIL91832.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_103_curated_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27306..27806
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
peroxiredoxin (EC:1.11.1.5)
Probable thiol peroxidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIE8_9GAMM
scnpilot_solids2_trim150_scaffold_103_curated_20
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28546..29556)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Dyella japonica RepID=UPI0003162A4A
scnpilot_solids2_trim150_scaffold_103_curated_21
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29676..30491
DNA (816bp) protein (272aa)
Endonuclease n=2 Tax=mine drainage metagenome RepID=T0YQ87_9ZZZZ
S1/P1 Nuclease {ECO:0000313|EMBL:GAN45683.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
S1/P1 Nuclease
scnpilot_solids2_trim150_scaffold_103_curated_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30620..31087)
DNA (468bp) protein (156aa)
Membrane protein containing DUF962 n=2 Tax=mine drainage metagenome RepID=T1AYV3_9ZZZZ
Membrane protein {ECO:0000313|EMBL:GAN45431.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_23
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31278..31613
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Myxococcus xanthus RepID=UPI000362F466
Uncharacterized protein {ECO:0000313|EMBL:AKF86575.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_103_curated_24
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31629..32525)
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI000368B6AA
scnpilot_solids2_trim150_scaffold_103_curated_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32636..32947
DNA (312bp) protein (104aa)
Cytochrome c553 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFY0_9GAMM
Cytochrome c553 {ECO:0000313|EMBL:EIL98371.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c553
scnpilot_solids2_trim150_scaffold_103_curated_26
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32944..33759
DNA (816bp) protein (272aa)
molecular chaperone DnaJ n=1 Tax=Dyella ginsengisoli RepID=UPI000348F03A
Molecular chaperone DnaJ {ECO:0000313|EMBL:GAN45427.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
protein with DnaJ-like domain
scnpilot_solids2_trim150_scaffold_103_curated_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33918..34583
DNA (666bp) protein (222aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN98_9GAMM
scnpilot_solids2_trim150_scaffold_103_curated_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35099..35788
DNA (690bp) protein (230aa)
Proteobacterial dedicated sortase system response regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS1_9GAMM
Chemotaxis protein CheY {ECO:0000313|EMBL:GAN45424.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
two component transcriptional regulator, winged helix family
scnpilot_solids2_trim150_scaffold_103_curated_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36033..38036
DNA (2004bp) protein (668aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X9_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_103_curated_30
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38191..39666
DNA (1476bp) protein (492aa)
Anthranilate synthase component I {ECO:0000313|EMBL:AIF46774.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AIF46774.1};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Rhodanobacter denitrificans RepID=I4WW49_9GAMM
Displaying items 1-30 of 188 in total

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