name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_392_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1580)
|
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Transcription-repair-coupling factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WL90_9GAMM
transcription-repair coupling factor Mfd
|
|
scnpilot_solids2_trim150_scaffold_392_curated_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1676..2209)
|
Sortase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM93_9GAMM
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGI77862.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
sortase-like acyltransferase
|
|
scnpilot_solids2_trim150_scaffold_392_curated_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2270..2785)
|
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VVL6_9GAMM
Starvation-inducible outer membrane lipoprotein {ECO:0000313|EMBL:EIL91257.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
starvation-inducible outer membrane lipoprotein
|
|
scnpilot_solids2_trim150_scaffold_392_curated_4 |
Not on your lists |
comp(2861..3703)
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003717A88
Protein containing DUF519 {ECO:0000313|EMBL:EQD55967.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
protein involved in catabolism of external DNA
|
|
scnpilot_solids2_trim150_scaffold_392_curated_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3842..5635
|
Copper-resistance protein, CopA family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW6_9GAMM
Copper-resistance protein, CopA family protein {ECO:0000313|EMBL:EIL89957.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copper-resistance protein, CopA family
|
|
scnpilot_solids2_trim150_scaffold_392_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5632..6456
|
Uncharacterized protein involved in copper resistance n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR0_9GAMM
uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_392_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6552..6710
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGS8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88858.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_392_curated_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6725..7471)
|
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00036D8166
Peptide methionine sulfoxide reductase MsrA
|
|
scnpilot_solids2_trim150_scaffold_392_curated_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7667..9970)
|
Nitric-oxide reductase subunit B n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBG7_9GAMM
Nitric-oxide reductase subunit B {ECO:0000313|EMBL:EIL96808.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
nitric oxide reductase large subunit
|
|
scnpilot_solids2_trim150_scaffold_392_curated_10
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10040..11206)
|
NnrS family protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DII2_9GAMM
Short-chain dehydrogenase {ECO:0000313|EMBL:AHE98232.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
NnrS protein superfamily; K07234 uncharacterized protein involved in response to NO
|
|
scnpilot_solids2_trim150_scaffold_392_curated_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11360..11779
|
DGPFAETKE family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE85_ANADF
DGPFAETKE family protein
DGPFAETKE family protein {ECO:0000313|EMBL:ABS27031.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
|
|
scnpilot_solids2_trim150_scaffold_392_curated_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11836..13104
|
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE
RNA polymerase subunit sigma-24
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AGP32752.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
|
|
scnpilot_solids2_trim150_scaffold_392_curated_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13423..13779
|
DGPF domain protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HL81_ACHXA
DGPF domain-containing protein 1
DGPF domain protein 1 {ECO:0000313|EMBL:ADP16928.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
|
|
scnpilot_solids2_trim150_scaffold_392_curated_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13904..15484)
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377F397
GntR family transcriptional regulator {ECO:0000313|EMBL:AHX15700.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
GntR family transcriptional regulator
|
|
scnpilot_solids2_trim150_scaffold_392_curated_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15607..16800
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036446C7
Uncharacterized protein {ECO:0000313|EMBL:AHX16473.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
|
|
scnpilot_solids2_trim150_scaffold_392_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16870..17271
|
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037DCE32
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
scnpilot_solids2_trim150_scaffold_392_curated_17
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17326..17721
|
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFII64 RepID=S6GUN1_9PSED
Membrane protein {ECO:0000313|EMBL:KFE57984.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_392_curated_18
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17775..18305
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000376910A
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACV27809.1}; Flags: Precursor;; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;"
|
|
scnpilot_solids2_trim150_scaffold_392_curated_19
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18475..19428)
|
Putative transcriptional regulator n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGB1_COLFT
Transcriptional regulator {ECO:0000313|EMBL:AIY39316.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
putative transcriptional regulator
|
|
scnpilot_solids2_trim150_scaffold_392_curated_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19552..20517
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W607_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45842.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_392_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20514..21149
|
Lysine exporter protein LysE/YggA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W606_9GAMM
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EIL94897.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine/threonine efflux protein
|
|
scnpilot_solids2_trim150_scaffold_392_curated_22
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21197..22558
|
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002F057DD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ71120.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
scnpilot_solids2_trim150_scaffold_392_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22592..23017)
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRI3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95015.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Barstar (barnase inhibitor)
|
|
scnpilot_solids2_trim150_scaffold_392_curated_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23014..23454)
|
Ribonuclease n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJE9_9GAMM
Ribonuclease {ECO:0000313|EMBL:EIL99590.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
guanyl-specific ribonuclease Sa
|
|
scnpilot_solids2_trim150_scaffold_392_curated_25 |
Not on your lists |
comp(23454..25025)
|
Peptidase S13, D-Ala-D-Ala carboxypeptidase C {ECO:0000313|EMBL:EQD37142.1}; EC=3.4.-.- {ECO:0000313|EMBL:EQD37142.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=mine drainage metagenome RepID=T0YYZ6_9ZZZZ
|
|
scnpilot_solids2_trim150_scaffold_392_curated_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25031..25873)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEZ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX13770.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_392_curated_27
unknown
|
Not on your lists |
comp(25870..26010)
|
This feature has no annotations |
|
scnpilot_solids2_trim150_scaffold_392_curated_28
unknown
|
Not on your lists |
26181..26282
|
This feature has no annotations |
|
scnpilot_solids2_trim150_scaffold_392_curated_29
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26309..27136)
|
Protein FdhD homolog n=3 Tax=Xanthomonas campestris pv. campestris RepID=FDHD_XANC8
fdsC; formate dehydrogenase accessory protein; K02379 FdhD protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
scnpilot_solids2_trim150_scaffold_392_curated_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27206..29026
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003636E9C
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|