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scnpilot_solids2_trim150_scaffold_103_curated_53

Organism: solids_Xanthomonadales_1

near complete RP 46 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: 66010..66546

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 173.0
  • Bit_score: 306
  • Evalue 2.10e-80
Peptide deformylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNX5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 173.0
  • Bit_score: 306
  • Evalue 1.50e-80
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 173.0
  • Bit_score: 305
  • Evalue 1.40e-80

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGATCCGTGAAATCCTCAAGATGGGTGACCCCCGCCTGCTGCGCGTGGCGCCGCCGGTACCGACCACGATGTTCGGCACCGCCGCGTTGAACGAGCTCATCACCGACATGTTCGAGACCATGCAGGCGGCCGATGGCGTGGGCCTCGCCGCGCCGCAGATCGGCGTGGACCTGCAACTGGTGGTGTTCGGCTTCGAGCACTCCGACCGCTATCCCGATGAGCCCGAAGTGCCCCGCACCATCCTGCTGAACCCGTTGATCACGCCGCTGTCGCACGACATGGAGGAGGGCTGGGAAGGGTGCCTGTCGGTGCCCGGCCTGCGCGGCGTCGTGAACCGGCACTCATTGATCCGTTACCAGGGCGTGGATCCGAGTGGTGTGGCGATCGACCGCACCGCCGAAGGTTTCCACGCGCGCGTGGTGCAGCACGAATGCGATCACCTGATCGGGCGGCTGTATCCTTCGCGCATCACCGATTTCACGCGCTTCGGCTTCATCGACGTGTTGTTTCCGGGCGAAGCCGGGCAGTTGGAGTAG
PROTEIN sequence
Length: 179
MIREILKMGDPRLLRVAPPVPTTMFGTAALNELITDMFETMQAADGVGLAAPQIGVDLQLVVFGFEHSDRYPDEPEVPRTILLNPLITPLSHDMEEGWEGCLSVPGLRGVVNRHSLIRYQGVDPSGVAIDRTAEGFHARVVQHECDHLIGRLYPSRITDFTRFGFIDVLFPGEAGQLE*