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AMDSBA3_8

Alias: AMDSBA3_C7

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Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_8_1
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..991
DNA (990bp) protein (330aa)
Transposase n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ53_9FIRM (db=UNIREF evalue=5.4e-173 bit_score=612.5 identity=93.0 coverage=99.39393939393939)
transposase IS116/IS110/IS902 family protein rbh
transposase IS116/IS110/IS902 family protein rbh
AMDSBA3_8_2
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1295..2275
DNA (981bp) protein (327aa)
aldo/keto reductase family protein
aldo/keto reductase family protein
Uncharacterized oxidoreductase YajO n=528 Tax=Enterobacteriaceae RepID=YAJO_ECOLI (db=UNIREF evalue=1.1e-104 bit_score=385.6 identity=58.0 coverage=98.77675840978594)
seg (db=Seg db_id=seg from=291 to=305)
AMDSBA3_8_3
unknown

Not on your lists

comp(2320..2841)
DNA (522bp) protein (174aa)
2320..2841 - ( gc_cont=0.556)
AMDSBA3_8_4
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3450..4358)
DNA (909bp) protein (303aa)
transcriptional regulator
Transcriptional activator MetR n=11 Tax=Alteromonadales RepID=Q3IKK4_PSEHT (db=UNIREF evalue=3.8e-08 bit_score=64.7 identity=23.7 coverage=86.13861386138613)
seg (db=Seg db_id=seg from=282 to=293)
seg (db=Seg db_id=seg from=205 to=214)
AMDSBA3_8_5
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4455..5738
DNA (1284bp) protein (428aa)
adenylosuccinate synthetase
adenylosuccinate synthetase
Adenylosuccinate synthetase n=1 Tax=Reinekea blandensis MED297 RepID=A4BDI0_9GAMM (db=UNIREF evalue=4.6e-100 bit_score=370.5 identity=48.0 coverage=96.49532710280374)
seg (db=Seg db_id=seg from=161 to=172)
AMDSBA3_8_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6858..8150
DNA (1293bp) protein (431aa)
group 1 glycosyl transferase rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TS96_9FIRM (db=UNIREF evalue=1.3e-139 bit_score=501.9 identity=58.1 coverage=96.75174013921114)
AMDSBA3_8_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8150..9397
DNA (1248bp) protein (416aa)
glycoside hydrolase family protein
glycoside hydrolase family protein
Putative alpha-amylase n=2 Tax=Methanocaldococcus RepID=AMYA_METJA (db=UNIREF evalue=3.6e-41 bit_score=174.9 identity=32.3 coverage=76.6826923076923)
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=1 to=361 evalue=1.0e-31 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
AMDSBA3_8_8
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9427..11811)
DNA (2385bp) protein (795aa)
glucan 1,4-alpha-glucosidase (EC:3.2.1.3)
glucan 1,4-alpha-glucosidase (EC:3.2.1.3)
Glucan 1,4-alpha-glucosidase n=1 Tax=Raphidiopsis brookii D9 RepID=D4TTT3_9NOST (db=UNIREF evalue=1.4e-105 bit_score=389.8 identity=34.5 coverage=86.79245283018868)
seg (db=Seg db_id=seg from=439 to=452)
AMDSBA3_8_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12025..13197
DNA (1173bp) protein (391aa)
nucleotidyl transferase
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Magnetococcus marinus MC-1 RepID=A0L7H4_MAGSM (db=UNIREF evalue=4.5e-17 bit_score=94.7 identity=31.5 coverage=58.05626598465473)
MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF15 from=9 to=343 evalue=2.8e-78)
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=9 to=343 evalue=2.8e-78)
AMDSBA3_8_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13313..15865)
DNA (2553bp) protein (851aa)
membrane alanyl aminopeptidase (EC:3.4.11.2)
Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QA88_MALGO (db=UNIREF evalue=3.1e-79 bit_score=302.4 identity=27.5 coverage=99.29494712103408)
seg (db=Seg db_id=seg from=561 to=570)
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=213 to=461 evalue=5.8e-80)
AMDSBA3_8_11
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16942..17970)
DNA (1029bp) protein (343aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Desulfosporosinus acidiphilus SJ4 RepID=I4D0L1_9FIRM (db=UNIREF evalue=1.6e-10 bit_score=72.8 identity=24.4 coverage=77.84256559766763)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=118 to=297 evalue=3.7e-23)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=124 to=282 evalue=1.7e-12)
(db=HMMPfam db_id=PF08241 from=143 to=235 evalue=9.9e-05 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
AMDSBA3_8_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18074..19255)
DNA (1182bp) protein (394aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WR55_ALIAD (db=UNIREF evalue=8.2e-43 bit_score=180.3 identity=30.7 coverage=98.98477157360406)
seg (db=Seg db_id=seg from=360 to=371)
seg (db=Seg db_id=seg from=326 to=340)
AMDSBA3_8_13
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19245..19928)
DNA (684bp) protein (228aa)
ABC transporter-like protein
Lipoprotein-releasing system ATP-binding protein LolD n=8 Tax=Treponema RepID=LOLD_TREPA (db=UNIREF evalue=4.8e-27 bit_score=127.1 identity=35.4 coverage=95.17543859649122)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=220 evalue=9.8e-108)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=141 to=155 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
AMDSBA3_8_14
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20223..20963)
DNA (741bp) protein (247aa)
ATPase
ABC transport system, ATP-binding protein n=1 Tax=Corynebacterium aurimucosum ATCC 700975 RepID=C3PJB6_CORA7 (db=UNIREF evalue=1.8e-24 bit_score=118.6 identity=36.6 coverage=81.37651821862349)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=31 to=216 evalue=2.4e-19)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=22 to=216 evalue=4.0e-09)
AMDSBA3_8_15
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(21108..23483)
DNA (2376bp) protein (792aa)
major facilitator superfamily protein
Putative uncharacterized protein n=1 Tax=Polysphondylium pallidum RepID=D3BJQ5_POLPA (db=UNIREF evalue=7.2e-14 bit_score=85.1 identity=28.0 coverage=31.439393939393938)
transmembrane_regions (db=TMHMM db_id=tmhmm from=346 to=368)
transmembrane_regions (db=TMHMM db_id=tmhmm from=378 to=400)
AMDSBA3_8_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23736..24608)
DNA (873bp) protein (291aa)
patatin
Patatin n=1 Tax=Odoribacter splanchnicus DSM 20712 RepID=F9Z6P6_ODOSD (db=UNIREF evalue=2.4e-07 bit_score=62.0 identity=34.4 coverage=36.769759450171826)
seg (db=Seg db_id=seg from=175 to=191)
seg (db=Seg db_id=seg from=35 to=50)
AMDSBA3_8_17
unknown

Not on your lists

comp(24997..25335)
DNA (339bp) protein (113aa)
seg (db=Seg db_id=seg from=59 to=70)
RESPONSE_REGULATORY (db=ProfileScan db_id=PS50110 from=1 to=55 evalue=9.174 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA3_8_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25332..26000)
DNA (669bp) protein (223aa)
endonuclease III (EC:4.2.99.18 3.2.2.-)
Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RC65_9FIRM (db=UNIREF evalue=4.6e-43 bit_score=180.3 identity=47.3 coverage=90.13452914798206)
ENDONUCLEASE_III_2 (db=PatternScan db_id=PS01155 from=105 to=134 evalue=0.0 interpro_id=IPR004036 interpro_description=Endonuclease III, conserved site-2 GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA repair (GO:0006281))
nth: endonuclease III (db=HMMTigr db_id=TIGR01083 from=6 to=197 evalue=1.2e-114 interpro_id=IPR005759 interpro_description=Endonuclease III/Nth GO=Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Cellular Component: intracellular (GO:0005622), Biological Process: base-excision repair (GO:0006284))
AMDSBA3_8_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25997..26467)
DNA (471bp) protein (157aa)
peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin YgaF n=9 Tax=Bacillus RepID=BCP_BACSU (db=UNIREF evalue=1.4e-33 bit_score=148.3 identity=48.7 coverage=94.26751592356688)
BACTERIOFERRITIN COMIGRATORY PROTEIN (db=HMMPanther db_id=PTHR10681:SF5 from=1 to=155 evalue=7.6e-60)
PEROXIREDOXIN (db=HMMPanther db_id=PTHR10681 from=1 to=155 evalue=7.6e-60)
AMDSBA3_8_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26548..27621)
DNA (1074bp) protein (358aa)
peptidase M24 rbh
Uncharacterized protein n=4 Tax=Strongylocentrotus purpuratus RepID=H3IY02_STRPU (db=UNIREF evalue=2.8e-13 bit_score=82.0 identity=26.7 coverage=64.52513966480447)
seg (db=Seg db_id=seg from=248 to=257)
seg (db=Seg db_id=seg from=7 to=20)
AMDSBA3_8_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27700..28563)
DNA (864bp) protein (288aa)
seg (db=Seg db_id=seg from=4 to=18)
seg (db=Seg db_id=seg from=164 to=176)
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=1 to=287 evalue=1.6e-29)
(db=HMMPfam db_id=PF07992 from=3 to=186 evalue=9.3e-15 interpro_id=IPR023753 interpro_description=Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA3_8_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28564..29439)
DNA (876bp) protein (292aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUD0_9FIRM (db=UNIREF evalue=3.1e-71 bit_score=274.2 identity=45.1 coverage=97.94520547945206)
seg (db=Seg db_id=seg from=221 to=236)
seg (db=Seg db_id=seg from=184 to=199)
AMDSBA3_8_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29638..30669
DNA (1032bp) protein (344aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
FabH2 n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XF08_9HELI (db=UNIREF evalue=6.7e-09 bit_score=67.4 identity=28.0 coverage=51.74418604651163)
seg (db=Seg db_id=seg from=59 to=75)
fabH: 3-oxoacyl-[acyl-carrier-protein] synth (db=HMMTigr db_id=TIGR00747 from=2 to=328 evalue=3.0e-111 interpro_id=IPR004655 interpro_description=Beta-ketoacyl-acyl carrier protein synthase III (FabH) GO=Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity (GO:0004315), Biological Process: fatty acid biosynthetic process (GO:0006633))
AMDSBA3_8_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30958..31446
DNA (489bp) protein (163aa)
heat shock protein DnaJ domain-containing protein
Heat shock protein DnaJ domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUD3_9FIRM (db=UNIREF evalue=1.1e-28 bit_score=132.1 identity=44.0 coverage=92.63803680981594)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=113)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
AMDSBA3_8_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31462..32271)
DNA (810bp) protein (270aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUD6_9FIRM (db=UNIREF evalue=1.6e-66 bit_score=258.5 identity=47.7 coverage=97.4074074074074)
seg (db=Seg db_id=seg from=214 to=228)
seg (db=Seg db_id=seg from=158 to=172)
AMDSBA3_8_26
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

32554..32934
DNA (381bp) protein (127aa)
two component response regulator KdpE
Two-component response transcriptional regulator n=1 Tax=Zunongwangia profunda SM-A87 RepID=D5BBT5_ZUNPS (db=UNIREF evalue=1.0e-07 bit_score=62.0 identity=28.4 coverage=88.9763779527559)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=123 evalue=3.7e-28 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=3 to=123 evalue=3.6e-24)
AMDSBA3_8_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33012..34049
DNA (1038bp) protein (346aa)
hypothetical protein rbh
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUD8_9FIRM (db=UNIREF evalue=2.0e-93 bit_score=348.2 identity=52.7 coverage=96.24277456647398)
seg (db=Seg db_id=seg from=249 to=258)
AMDSBA3_8_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34028..35653
DNA (1626bp) protein (542aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TUE0_9FIRM (db=UNIREF evalue=2.4e-170 bit_score=604.4 identity=60.0 coverage=91.14391143911439)
AMDSBA3_8_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36016..36510
DNA (495bp) protein (165aa)
HNH endonuclease
HNH endonuclease n=2 Tax=Sulfobacillus acidophilus RepID=G8TUE1_9FIRM (db=UNIREF evalue=7.1e-65 bit_score=252.3 identity=68.6 coverage=95.75757575757575)
no description (db=HMMSmart db_id=SM00507 from=21 to=70 evalue=9.7e-11 interpro_id=IPR003615 interpro_description=HNH nuclease)
(db=HMMPfam db_id=PF01844 from=34 to=72 evalue=7.8e-08 interpro_id=IPR002711 interpro_description=HNH endonuclease GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: endonuclease activity (GO:0004519))
AMDSBA3_8_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(36600..38270)
DNA (1671bp) protein (557aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=4 Tax=Leptospira RepID=SYR_LEPBJ (db=UNIREF evalue=5.1e-91 bit_score=340.9 identity=36.3 coverage=93.71633752244165)
seg (db=Seg db_id=seg from=179 to=194)
Displaying items 1-30 of 63 in total

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