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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104

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Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43..456)
DNA (414bp) protein (138aa)
id=2159586 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
id=2159586 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(694..6585)
DNA (5892bp) protein (1964aa)
large extracellular alpha-helical protein Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor plug id=2159587 bin=GWE2_Bacteroidetes_40_63 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
outer membrane protein with CnaB and TonB plug receptor domains
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6783..8174)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein id=2159588 bin=GWE2_Bacteroidetes_40_63 species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8385..8918)
DNA (534bp) protein (178aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=GWE2_Bacteroidetes_40_63_curated
shikimate kinase id=4004054 bin=GWC2_Bacteroidetes_40_13 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
shikimate kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8934..9920)
DNA (987bp) protein (329aa)
TIGR01212 family radical SAM protein id=1878024 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein; K07139 Tax=GWE2_Bacteroidetes_40_63_curated
radical SAM protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9925..10953)
DNA (1029bp) protein (343aa)
aromatic amino acid beta-eliminating lyase/threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] Tax=GWE2_Bacteroidetes_40_63_curated
Aromatic amino acid beta-eliminating lyase/threonine aldolase id=1878029 bin=GWD2_Bacteroidetes_40_43 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
aromatic amino acid beta-eliminating lyase/threonine aldolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11192..12856
DNA (1665bp) protein (555aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Tetratricopeptide repeat protein id=1878031 bin=GWD2_Bacteroidetes_40_43 species=Crinalium epipsammum genus=Crinalium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12862..13479
DNA (618bp) protein (206aa)
Tetratricopeptide repeat protein id=1878031 bin=GWD2_Bacteroidetes_40_43 species=Crinalium epipsammum genus=Crinalium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13562..16753
DNA (3192bp) protein (1064aa)
periplasmic ligand-binding sensor domain protein Tax=GWE2_Bacteroidetes_40_63_curated
serine/threonine protein kinase id=1878032 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
periplasmic ligand-binding sensor domain protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16782..18227
DNA (1446bp) protein (482aa)
thioredoxin family protein (EC:1.8.1.8) Tax=GWE2_Bacteroidetes_40_63_curated
thioredoxin family protein (EC:1.8.1.8)
Thioredoxin family protein id=3382937 bin=GWF2_Bacteroidetes_40_13 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18313..18885
DNA (573bp) protein (191aa)
Predicted transporter, GPR1/FUN34/yaaH family id=3382939 bin=GWF2_Bacteroidetes_40_13 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
GPR1/FUN34/yaaH family transporter Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18955..19662)
DNA (708bp) protein (236aa)
Probable transcriptional regulatory protein Oweho_0830 id=1878035 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
YebC/PmpR family DNA-binding regulatory protein Tax=GWE2_Bacteroidetes_40_63_curated
transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19929..20333
DNA (405bp) protein (135aa)
CheY-like receiver domain-containing protein id=3382944 bin=GWF2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
CheY-like receiver domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
CheY-like receiver domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20407..21330)
DNA (924bp) protein (308aa)
Thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWE2_Bacteroidetes_40_63_curated
thioredoxin-disulfide reductase id=3382946 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
thioredoxin reductase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21593..21940)
DNA (348bp) protein (116aa)
Uncharacterized protein id=4212093 bin=GWA2_Bacteroidetes_40_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21963..22295)
DNA (333bp) protein (111aa)
hypothetical protein
id=1878050 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1878050 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22440..23507)
DNA (1068bp) protein (356aa)
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61) Tax=GWE2_Bacteroidetes_40_63_curated
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA id=3382951 bin=GWF2_Bacteroidetes_40_13 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23770..24465
DNA (696bp) protein (232aa)
hypothetical protein MsalJ2_17792 id=1878054 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24849..25418
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=1878057 bin=GWD2_Bacteroidetes_40_43 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25441..26709
DNA (1269bp) protein (423aa)
Putative uncharacterized protein id=4161481 bin=GWC2_Bacteroidetes_40_13 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26745..26957
DNA (213bp) protein (71aa)
id=1878063 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1878063 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27127..27573
DNA (447bp) protein (149aa)
BadM/Rrf2 family transcriptional regulator id=3382960 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
BadM/Rrf2 family transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
BadM/Rrf2 family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27587..29134
DNA (1548bp) protein (516aa)
putative iron-regulated transmembrane protein Tax=GWE2_Bacteroidetes_40_63_curated
iron-regulated transmembrane protein id=1878067 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
putative iron-regulated transmembrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29154..30530)
DNA (1377bp) protein (459aa)
Integral membrane sensor signal transduction histidine kinase id=1878072 bin=GWD2_Bacteroidetes_40_43 species=Leptospira terpstrae genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30706..32886
DNA (2181bp) protein (727aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein AtheD1_16955 id=1878075 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33169..34239)
DNA (1071bp) protein (357aa)
threonine dehydratase Tax=GWE2_Bacteroidetes_40_63_curated
Phenylserine dehydratase id=1878078 bin=GWD2_Bacteroidetes_40_43 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
serine dehydratase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34350..35075
DNA (726bp) protein (242aa)
Sulfate-transporting ATPase (EC:3.6.3.25); K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWE2_Bacteroidetes_40_63_curated
Sulfate-transporting ATPase (EC:3.6.3.25)
Sulfate-transporting ATPase id=2159634 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35097..37574
DNA (2478bp) protein (826aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=3382970 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37659..40313)
DNA (2655bp) protein (885aa)
DNA topoisomerase (ATP-hydrolyzing) (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-] Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=3382971 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
DNA topoisomerase IV subunit A
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40377..42212)
DNA (1836bp) protein (612aa)
DNA topoisomerase type IIA subunit B region 2 domain-containing protein; K02622 topoisomerase IV subunit B [EC:5.99.1.-] Tax=GWE2_Bacteroidetes_40_63_curated
DNA topoisomerase type IIA subunit B region 2 domain protein id=3382972 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
DNA topoisomerase type IIA subunit B region 2 domain-containing protein
Displaying items 1-30 of 97 in total

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