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A1-16-all-fractions_metab_12

wsip-metawrap-drep-bins_Actinobacteria_71_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.66 Longest contig: 21.82 Kbp Bin length: 5.34 Mbp GC content: 70.72 %
Contigs count: 1126 Features count: 5687 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Displaying items 651-700 of 1126 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
A1-16-all-fractions_k255_2528747
Phylum: Actinobacteria (60%)
5 3707 bp 67.66 0.65 89.51
A1-16-all-fractions_k255_1446151
Genus: Streptomyces (50%)
6 6496 bp 73.35 0.58 89.46
A1-16-all-fractions_k255_1894929
Class: Actinobacteria (100%)
9 8931 bp 71.37 0.74 89.45
A1-16-all-fractions_k255_3922084
Species: Thermomonospora curvata (60%)
5 4853 bp 68.78 0.40 89.45
A1-16-all-fractions_k255_3341054
Order: Pseudonocardiales (60%)
5 4227 bp 70.19 0.64 89.43
A1-16-all-fractions_k255_1164642
Genus: Streptomyces (75%)
4 3593 bp 72.89 0.42 89.42
A1-16-all-fractions_k255_3266774
Class: Actinobacteria (81.82%)
11 8066 bp 71.08 7.48 89.41
A1-16-all-fractions_k255_2886106
Class: Actinobacteria (75%)
4 2446 bp 71.42 0.43 89.41
A1-16-all-fractions_k255_4685108
Species: Mycobacterium cosmeticum (50%)
2 1926 bp 67.55 1.71 89.41
A1-16-all-fractions_k255_4331609
Species: Streptomyces scabiei (50%)
2 2020 bp 73.02 0.45 89.41
A1-16-all-fractions_k255_575093
Genus: Streptomyces (66.67%)
3 2507 bp 69.92 2.15 89.39
A1-16-all-fractions_k255_1052162
Domain: Bacteria (66.67%)
3 2051 bp 65.87 0.44 89.37
A1-16-all-fractions_k255_4626687
Class: Actinobacteria (66.67%)
6 4337 bp 67.77 0.59 89.37
A1-16-all-fractions_k255_1333762
Order: Pseudonocardiales (75%)
4 3043 bp 67.76 0.64 89.32
A1-16-all-fractions_k255_1698454
Species: Streptosporangium roseum (50%)
2 2734 bp 69.60 0.88 89.32
A1-16-all-fractions_k255_1742786
Species: GWC2_RIF_CHLX_73_18_curated (50%)
4 3366 bp 69.88 0.62 89.30
A1-16-all-fractions_k255_4533096
Class: Actinobacteria (80%)
5 6188 bp 68.33 0.65 89.30
A1-16-all-fractions_k255_3389257
Class: Actinobacteria (83.33%)
6 5876 bp 70.46 1.02 89.30
A1-16-all-fractions_k255_3674975
Species: Saccharomonospora marina (50%)
2 2409 bp 71.27 0.87 89.29
A1-16-all-fractions_k255_2002383
Order: Streptosporangiales (66.67%)
3 4837 bp 70.00 0.78 89.25
A1-16-all-fractions_k255_5038739
Class: Actinobacteria (83.33%)
6 3022 bp 68.23 0.60 89.25
A1-16-all-fractions_k255_3898970 5 5965 bp 73.46 0.45 89.17
A1-16-all-fractions_k255_4391847
Species: Modestobacter multiseptatus (50%)
2 3859 bp 72.92 0.27 89.17
A1-16-all-fractions_k255_1096676
Genus: Streptomyces (60%)
5 6669 bp 71.57 0.63 89.11
A1-16-all-fractions_k255_552196
Class: Actinobacteria (80%)
5 4515 bp 70.41 0.80 89.10
A1-16-all-fractions_k255_2604731
Class: Actinobacteria (85.71%)
7 4441 bp 71.99 0.71 89.10
A1-16-all-fractions_k255_3432960
Species: Streptosporangium roseum (50%)
4 2751 bp 69.61 0.27 89.09
A1-16-all-fractions_k255_3780291
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1677 bp 72.63 0.89 89.09
A1-16-all-fractions_k255_4613822
Class: Actinobacteria (100%)
5 3930 bp 70.92 0.31 89.08
A1-16-all-fractions_k255_3138074
Species: Kibdelosporangium sp. MJ126-NF4 (60%)
5 3378 bp 69.72 1.02 89.08
A1-16-all-fractions_k255_3511788
Class: Actinobacteria (80%)
5 7619 bp 71.47 0.63 89.07
A1-16-all-fractions_k255_3929801
Species: Massilia sp. JS1662 (50%)
4 2752 bp 68.39 0.38 89.06
A1-16-all-fractions_k255_2588936
Class: Actinobacteria (80%)
10 9614 bp 68.71 0.61 89.06
A1-16-all-fractions_k255_1439495
Species: Catenulispora acidiphila (50%)
6 6953 bp 69.80 0.67 89.06
A1-16-all-fractions_k255_1496775
Class: Actinobacteria (83.33%)
6 5866 bp 69.98 0.59 89.04
A1-16-all-fractions_k255_1408025
Class: Actinobacteria (71.43%)
7 5327 bp 68.27 0.51 89.04
A1-16-all-fractions_k255_1794321
Class: Actinobacteria (50%)
4 2709 bp 71.06 0.78 89.04
A1-16-all-fractions_k255_2867154
Order: Streptosporangiales (70%)
10 8525 bp 70.10 0.53 89.03
A1-16-all-fractions_k255_4993329 3 1668 bp 70.08 0.72 89.03
A1-16-all-fractions_k255_1258474
Order: Streptosporangiales (75%)
8 5641 bp 68.99 0.80 89.03
A1-16-all-fractions_k255_2914925
Species: Streptosporangium roseum (50%)
2 2973 bp 67.68 1.51 89.00
A1-16-all-fractions_k255_2032221
Order: Streptosporangiales (66.67%)
6 4399 bp 70.49 0.34 89.00
A1-16-all-fractions_k255_4025496
Order: Streptosporangiales (50%)
8 8158 bp 70.56 0.77 88.96
A1-16-all-fractions_k255_3572539
Class: Actinobacteria (100%)
5 6845 bp 69.79 0.79 88.93
A1-16-all-fractions_k255_1534500
Species: Ktedonobacter racemifer (100%)
2 1562 bp 65.69 1.15 88.92
A1-16-all-fractions_k255_2722267
Species: Acidithrix ferrooxidans (50%)
2 3219 bp 72.69 0.33 88.91
A1-16-all-fractions_k255_1407531
Class: Actinobacteria (57.14%)
7 8058 bp 71.46 0.74 88.91
A1-16-all-fractions_k255_1508466
Genus: Micromonospora (57.14%)
7 10462 bp 69.93 0.47 88.86
A1-16-all-fractions_k255_3728950
Species: Thermomonospora curvata (50%)
2 2782 bp 68.66 0.54 88.86
A1-16-all-fractions_k255_2250278
Genus: Streptomyces (50%)
6 5690 bp 72.25 0.53 88.84
Displaying items 651-700 of 1126 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.