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A1-16-all-fractions_metab_12

wsip-metawrap-drep-bins_Actinobacteria_71_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.66 Longest contig: 21.82 Kbp Bin length: 5.34 Mbp GC content: 70.72 %
Contigs count: 1126 Features count: 5687 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Displaying items 51-100 of 1126 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
A1-16-all-fractions_k255_874068
Species: Streptomyces sp. NRRL S-104 (50%)
2 1919 bp 67.85 0.16 74.26
A1-16-all-fractions_k255_4331609
Species: Streptomyces scabiei (50%)
2 2020 bp 73.02 0.45 89.41
A1-16-all-fractions_k255_882867
Species: Microlunatus phosphovorus (50%)
2 1876 bp 70.95 0.32 95.79
A1-16-all-fractions_k255_2096532
Species: Streptomyces scabiei (50%)
2 2211 bp 70.51 1.22 95.79
A1-16-all-fractions_k255_3225024
Species: R_Acidobacteria_67_21 (50%)
2 1638 bp 67.28 1.56 92.31
A1-16-all-fractions_k255_4379619
Species: Catenulispora acidiphila (50%)
2 3053 bp 68.59 0.69 94.33
A1-16-all-fractions_k255_1014605
Species: Nocardiopsis dassonvillei (50%)
2 1685 bp 72.17 0.53 68.72
A1-16-all-fractions_k255_2120474
Species: Thermobispora bispora (50%)
2 1568 bp 73.41 0.48 96.24
A1-16-all-fractions_k255_4391847
Species: Modestobacter multiseptatus (50%)
2 3859 bp 72.92 0.27 89.17
A1-16-all-fractions_k255_946347
Species: Microvirga aerilata (50%)
2 1789 bp 67.13 2.77 93.40
A1-16-all-fractions_k255_947350
Species: Conexibacter woesei (100%)
2 1754 bp 70.01 0.00 91.16
A1-16-all-fractions_k255_2151574
Species: Actinoplanes utahensis (50%)
2 1690 bp 75.27 0.71 94.08
A1-16-all-fractions_k255_3281749
Species: Microbispora sp. ATCC PTA-5024 (50%)
2 2132 bp 72.98 2.46 100.33
A1-16-all-fractions_k255_4399550
Species: Amycolatopsis japonica (50%)
2 1611 bp 72.56 0.00 78.03
A1-16-all-fractions_k255_2159868
Species: Kineosphaera limosa (50%)
2 2378 bp 70.69 0.50 100.04
A1-16-all-fractions_k255_4433655
Species: Streptomyces sp. HGB0020 (50%)
2 2544 bp 77.12 0.35 100.00
A1-16-all-fractions_k255_3309855
Species: Streptomyces sp. RSD-27 (50%)
2 2952 bp 71.31 0.46 97.15
A1-16-all-fractions_k255_2166472
Species: Amycolatopsis decaplanina (50%)
2 1795 bp 70.08 0.33 83.90
A1-16-all-fractions_k255_1044588
Species: Blastopirellula marina (50%)
2 1543 bp 72.78 0.19 93.71
A1-16-all-fractions_k255_3332752
Species: Conexibacter woesei (50%)
2 2210 bp 71.22 0.27 92.44
A1-16-all-fractions_k255_4460941
Species: Modestobacter multiseptatus (50%)
2 1657 bp 71.64 0.45 88.17
A1-16-all-fractions_k255_1060318
Species: Amycolatopsis mediterranei (50%)
2 1846 bp 65.11 0.16 94.42
A1-16-all-fractions_k255_3337909
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1896 bp 67.46 0.32 94.78
A1-16-all-fractions_k255_2207543
Species: Saccharomonospora marina (50%)
2 2142 bp 67.18 0.14 96.50
A1-16-all-fractions_k255_4472921
Species: Microbispora sp. ATCC PTA-5024 (50%)
2 1744 bp 71.96 0.34 82.40
A1-16-all-fractions_k255_3366401
Species: Thermobifida fusca (100%)
2 2886 bp 70.62 0.21 93.97
A1-16-all-fractions_k255_4515712
Species: Frankia sp. BMG5.23 (50%)
2 1634 bp 72.40 0.00 88.31
A1-16-all-fractions_k255_4544234
Species: Microbacterium oxydans (50%)
2 3656 bp 72.35 0.98 79.92
A1-16-all-fractions_k255_2259797
Species: Streptomyces afghaniensis (50%)
2 1629 bp 75.02 0.37 99.63
A1-16-all-fractions_k255_4553693
Species: Kineosphaera limosa (50%)
2 2214 bp 68.25 0.14 72.22
A1-16-all-fractions_k255_3410248
Species: Variovorax paradoxus (50%)
2 1556 bp 72.37 1.93 98.91
A1-16-all-fractions_k255_1154706
Species: Mycobacterium vanbaalenii (50%)
2 2097 bp 71.58 0.50 74.82
A1-16-all-fractions_k255_4594434
Species: Streptosporangium roseum (100%)
2 1688 bp 70.68 1.95 94.02
A1-16-all-fractions_k255_3413888
Species: Rubrobacter xylanophilus (50%)
2 1594 bp 70.58 1.04 77.92
A1-16-all-fractions_k255_4600314
Species: Metarhizium anisopliae (50%)
2 1567 bp 73.96 0.67 93.81
A1-16-all-fractions_k255_1162122
Species: Gloeocapsa sp. PCC 7428 (50%)
2 3096 bp 71.90 0.97 99.61
A1-16-all-fractions_k255_4609776
Species: Tetraselmis sp. GSL018 (50%)
2 1526 bp 70.31 0.29 85.91
A1-16-all-fractions_k255_1186746
Species: Thermomonospora curvata (100%)
2 2680 bp 70.75 0.62 98.84
A1-16-all-fractions_k255_3455270
Species: Frankia sp. EUN1f (50%)
2 1905 bp 69.29 1.18 89.61
A1-16-all-fractions_k255_2341506
Species: Alicyclobacillus acidoterrestris (50%)
2 1879 bp 69.13 0.56 100.11
A1-16-all-fractions_k255_2362329
Species: Streptomyces griseus (50%)
2 3084 bp 72.57 1.56 66.73
A1-16-all-fractions_k255_4678633
Species: Conexibacter woesei (50%)
2 2085 bp 69.06 0.79 95.54
A1-16-all-fractions_k255_1234499
Species: Tolypothrix campylonemoides (50%)
2 1795 bp 70.75 0.58 87.58
A1-16-all-fractions_k255_4685108
Species: Mycobacterium cosmeticum (50%)
2 1926 bp 67.55 1.71 89.41
A1-16-all-fractions_k255_4688337
Species: Gordonia bronchialis (50%)
2 1719 bp 70.68 0.61 79.58
A1-16-all-fractions_k255_2408744
Species: Tetrasphaera australiensis (50%)
2 1615 bp 68.61 0.37 99.57
A1-16-all-fractions_k255_3521649
Species: Amycolatopsis mediterranei (50%)
2 1810 bp 69.83 0.91 93.48
A1-16-all-fractions_k255_4698733
Species: Geodermatophilus obscurus (50%)
2 3107 bp 70.36 0.72 96.46
A1-16-all-fractions_k255_4705122
Species: Frankia sp. EuI1c (50%)
2 3223 bp 67.89 0.28 93.27
A1-16-all-fractions_k255_4716287
Species: Streptomyces sp. NTK 937 (50%)
2 1694 bp 73.14 1.24 95.10
Displaying items 51-100 of 1126 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.