ggKbase | organisms

Consensus taxonomy: Actinobacteria → Actinobacteria → Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.66 Longest contig: 21.82 Kbp Bin length: 5.34 Mbp GC content: 70.72 %

Contigs count: 1126 Features count: 5687 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1

Displaying items 101-150 of 1126 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
A1-16-all-fractions_k255_3392 Species: Streptomyces himastatinicus (50%)	2	2246 bp	72.31	0.73	88.82
A1-16-all-fractions_k255_4724994 Species: Mycobacterium canettii (50%)	2	1556 bp	69.99	0.00	95.82
A1-16-all-fractions_k255_3564117 Species: Bradyrhizobium sp. DOA9 (50%)	2	1927 bp	70.26	0.70	91.23
A1-16-all-fractions_k255_8241 Species: Kutzneria albida (50%)	2	1823 bp	70.98	2.06	97.59
A1-16-all-fractions_k255_3564424 Species: Streptococcus pneumoniae (50%)	2	2791 bp	69.58	0.48	69.12
A1-16-all-fractions_k255_4742974 Species: Ilumatobacter coccineus (50%)	2	1659 bp	67.57	0.00	89.69
A1-16-all-fractions_k255_8907 Species: Streptomyces sp. NRRL S-495 (50%)	2	2524 bp	71.59	2.44	96.99
A1-16-all-fractions_k255_1325497 Species: Microbispora sp. ATCC PTA-5024 (50%)	2	2365 bp	72.30	0.76	83.85
A1-16-all-fractions_k255_2500634 Species: Actinoplanes friuliensis (50%)	2	1675 bp	71.22	0.81	81.31
A1-16-all-fractions_k255_3570098 Species: Cellulomonas fimi (50%)	2	1870 bp	69.73	0.24	94.33
A1-16-all-fractions_k255_25920 Species: Thermobispora bispora (50%)	2	1557 bp	71.93	0.48	92.10
A1-16-all-fractions_k255_1335949 Species: Sulfobacillus acidophilus (50%)	2	1693 bp	67.57	0.18	71.23
A1-16-all-fractions_k255_1340860 Species: Arthrobacter arilaitensis (50%)	2	2224 bp	67.18	1.01	99.82
A1-16-all-fractions_k255_3587176 Species: Streptomyces fradiae (50%)	2	1956 bp	74.18	4.37	97.09
A1-16-all-fractions_k255_36195 Species: Streptomyces hygroscopicus (50%)	2	2260 bp	69.03	1.33	74.60
A1-16-all-fractions_k255_37174 Species: Catenulispora acidiphila (50%)	2	2342 bp	66.87	0.51	90.05
A1-16-all-fractions_k255_4768441 Species: Cellulomonas fimi (50%)	2	1683 bp	71.66	0.71	95.54
A1-16-all-fractions_k255_4785859 Species: Conexibacter woesei (100%)	2	2262 bp	71.26	0.20	100.00
A1-16-all-fractions_k255_1376584 Species: Nocardia cyriacigeorgica (50%)	2	1661 bp	68.99	0.27	93.20
A1-16-all-fractions_k255_3616268 Species: Thermomonospora curvata (50%)	2	1555 bp	71.51	0.58	100.13
A1-16-all-fractions_k255_4812141 Species: Thermomonospora curvata (50%)	2	2840 bp	73.38	0.53	90.21
A1-16-all-fractions_k255_2540827	2	1833 bp	71.03	1.64	78.23
A1-16-all-fractions_k255_3647618 Species: Thermomonospora curvata (50%)	2	1987 bp	70.91	0.30	96.18
A1-16-all-fractions_k255_3647964 Species: Amycolatopsis vancoresmycina (50%)	2	5088 bp	72.54	0.50	81.19
A1-16-all-fractions_k255_94439 Species: Cellulosimicrobium sp. MM (50%)	2	1705 bp	71.67	0.88	82.87
A1-16-all-fractions_k255_2572198 Species: Conexibacter woesei (50%)	2	1728 bp	72.69	0.61	83.85
A1-16-all-fractions_k255_3674975 Species: Saccharomonospora marina (50%)	2	2409 bp	71.27	0.87	89.29
A1-16-all-fractions_k255_100026 Species: Rhodococcus jostii (50%)	2	1641 bp	70.44	4.20	96.16
A1-16-all-fractions_k255_3678638 Species: uncultured bacterium 14-4D (50%)	2	1518 bp	63.11	0.49	88.34
A1-16-all-fractions_k255_2575837 Species: Streptomonospora alba (50%)	2	4032 bp	69.97	0.52	81.10
A1-16-all-fractions_k255_4863817 Species: Kribbella flavida (50%)	2	1845 bp	70.57	0.73	95.28
A1-16-all-fractions_k255_116220 Species: Frankia sp. EAN1pec (50%)	2	1697 bp	67.59	1.24	65.06
A1-16-all-fractions_k255_119475 Species: Streptomyces iranensis (50%)	2	1620 bp	65.25	0.00	86.11
A1-16-all-fractions_k255_1478505 Species: Pseudonocardia dioxanivorans (100%)	2	1529 bp	69.06	0.59	90.26
A1-16-all-fractions_k255_2609948 Species: Mycobacterium thermoresistibile (50%)	2	1544 bp	71.63	0.97	95.01
A1-16-all-fractions_k255_3728950 Species: Thermomonospora curvata (50%)	2	2782 bp	68.66	0.54	88.86
A1-16-all-fractions_k255_4922953 Species: Blastococcus saxobsidens (50%)	2	1517 bp	68.03	0.59	52.21
A1-16-all-fractions_k255_204277 Species: Ktedonobacter racemifer (50%)	2	1719 bp	72.66	0.00	91.10
A1-16-all-fractions_k255_3745757 Species: Catenulispora acidiphila (50%)	2	2057 bp	70.20	0.73	76.28
A1-16-all-fractions_k255_2652759 Species: Kutzneria albida (50%)	2	2168 bp	73.29	0.55	84.13
A1-16-all-fractions_k255_3766173 Species: Rhodococcus triatomae (50%)	2	2628 bp	66.40	0.68	84.13
A1-16-all-fractions_k255_1519234 Species: Eimeria necatrix (50%)	2	1954 bp	70.16	0.31	93.19
A1-16-all-fractions_k255_3772667 Species: RBG_16_RIF_CHLX_72_14_curated (50%)	2	2006 bp	67.90	2.99	81.36
A1-16-all-fractions_k255_238427 Species: Thermomonospora curvata (50%)	2	3818 bp	71.24	0.75	92.17
A1-16-all-fractions_k255_241316 Species: Mycobacterium canettii (50%)	2	1501 bp	68.15	4.50	90.74
A1-16-all-fractions_k255_2681343 Species: Frankia sp. CcI3 (50%)	2	1711 bp	71.30	0.79	80.83
A1-16-all-fractions_k255_1534500 Species: Ktedonobacter racemifer (100%)	2	1562 bp	65.69	1.15	88.92
A1-16-all-fractions_k255_2683472 Species: Kitasatospora setae (50%)	2	3249 bp	68.05	0.32	90.86
A1-16-all-fractions_k255_3780291 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)	2	1677 bp	72.63	0.89	89.09
A1-16-all-fractions_k255_4969635 Species: Thermomonospora curvata (100%)	2	2090 bp	72.97	0.65	99.76

Displaying items 101-150 of 1126 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (A1-16-all-fractions_metab_12) and add all its contigs / scaffolds to the organism you choose below

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A1-16-all-fractions_metab_12

wsip-metawrap-drep-bins_Actinobacteria_71_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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