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A1-16-all-fractions_metab_12

wsip-metawrap-drep-bins_Actinobacteria_71_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.66 Longest contig: 21.82 Kbp Bin length: 5.34 Mbp GC content: 70.72 %
Contigs count: 1126 Features count: 5687 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Displaying items 951-1000 of 1126 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
A1-16-all-fractions_k255_4472921
Species: Microbispora sp. ATCC PTA-5024 (50%)
2 1744 bp 71.96 0.34 82.40
A1-16-all-fractions_k255_3366401
Species: Thermobifida fusca (100%)
2 2886 bp 70.62 0.21 93.97
A1-16-all-fractions_k255_4515712
Species: Frankia sp. BMG5.23 (50%)
2 1634 bp 72.40 0.00 88.31
A1-16-all-fractions_k255_4544234
Species: Microbacterium oxydans (50%)
2 3656 bp 72.35 0.98 79.92
A1-16-all-fractions_k255_2259797
Species: Streptomyces afghaniensis (50%)
2 1629 bp 75.02 0.37 99.63
A1-16-all-fractions_k255_4553693
Species: Kineosphaera limosa (50%)
2 2214 bp 68.25 0.14 72.22
A1-16-all-fractions_k255_3410248
Species: Variovorax paradoxus (50%)
2 1556 bp 72.37 1.93 98.91
A1-16-all-fractions_k255_1154706
Species: Mycobacterium vanbaalenii (50%)
2 2097 bp 71.58 0.50 74.82
A1-16-all-fractions_k255_4594434
Species: Streptosporangium roseum (100%)
2 1688 bp 70.68 1.95 94.02
A1-16-all-fractions_k255_3413888
Species: Rubrobacter xylanophilus (50%)
2 1594 bp 70.58 1.04 77.92
A1-16-all-fractions_k255_4600314
Species: Metarhizium anisopliae (50%)
2 1567 bp 73.96 0.67 93.81
A1-16-all-fractions_k255_1162122
Species: Gloeocapsa sp. PCC 7428 (50%)
2 3096 bp 71.90 0.97 99.61
A1-16-all-fractions_k255_4609776
Species: Tetraselmis sp. GSL018 (50%)
2 1526 bp 70.31 0.29 85.91
A1-16-all-fractions_k255_1186746
Species: Thermomonospora curvata (100%)
2 2680 bp 70.75 0.62 98.84
A1-16-all-fractions_k255_3455270
Species: Frankia sp. EUN1f (50%)
2 1905 bp 69.29 1.18 89.61
A1-16-all-fractions_k255_2341506
Species: Alicyclobacillus acidoterrestris (50%)
2 1879 bp 69.13 0.56 100.11
A1-16-all-fractions_k255_2362329
Species: Streptomyces griseus (50%)
2 3084 bp 72.57 1.56 66.73
A1-16-all-fractions_k255_4678633
Species: Conexibacter woesei (50%)
2 2085 bp 69.06 0.79 95.54
A1-16-all-fractions_k255_1234499
Species: Tolypothrix campylonemoides (50%)
2 1795 bp 70.75 0.58 87.58
A1-16-all-fractions_k255_4685108
Species: Mycobacterium cosmeticum (50%)
2 1926 bp 67.55 1.71 89.41
A1-16-all-fractions_k255_4688337
Species: Gordonia bronchialis (50%)
2 1719 bp 70.68 0.61 79.58
A1-16-all-fractions_k255_2408744
Species: Tetrasphaera australiensis (50%)
2 1615 bp 68.61 0.37 99.57
A1-16-all-fractions_k255_3521649
Species: Amycolatopsis mediterranei (50%)
2 1810 bp 69.83 0.91 93.48
A1-16-all-fractions_k255_4698733
Species: Geodermatophilus obscurus (50%)
2 3107 bp 70.36 0.72 96.46
A1-16-all-fractions_k255_4705122
Species: Frankia sp. EuI1c (50%)
2 3223 bp 67.89 0.28 93.27
A1-16-all-fractions_k255_4716287
Species: Streptomyces sp. NTK 937 (50%)
2 1694 bp 73.14 1.24 95.10
A1-16-all-fractions_k255_3392
Species: Streptomyces himastatinicus (50%)
2 2246 bp 72.31 0.73 88.82
A1-16-all-fractions_k255_4724994
Species: Mycobacterium canettii (50%)
2 1556 bp 69.99 0.00 95.82
A1-16-all-fractions_k255_3564117
Species: Bradyrhizobium sp. DOA9 (50%)
2 1927 bp 70.26 0.70 91.23
A1-16-all-fractions_k255_8241
Species: Kutzneria albida (50%)
2 1823 bp 70.98 2.06 97.59
A1-16-all-fractions_k255_3564424
Species: Streptococcus pneumoniae (50%)
2 2791 bp 69.58 0.48 69.12
A1-16-all-fractions_k255_4742974
Species: Ilumatobacter coccineus (50%)
2 1659 bp 67.57 0.00 89.69
A1-16-all-fractions_k255_8907
Species: Streptomyces sp. NRRL S-495 (50%)
2 2524 bp 71.59 2.44 96.99
A1-16-all-fractions_k255_1325497
Species: Microbispora sp. ATCC PTA-5024 (50%)
2 2365 bp 72.30 0.76 83.85
A1-16-all-fractions_k255_2500634
Species: Actinoplanes friuliensis (50%)
2 1675 bp 71.22 0.81 81.31
A1-16-all-fractions_k255_3570098
Species: Cellulomonas fimi (50%)
2 1870 bp 69.73 0.24 94.33
A1-16-all-fractions_k255_25920
Species: Thermobispora bispora (50%)
2 1557 bp 71.93 0.48 92.10
A1-16-all-fractions_k255_1335949
Species: Sulfobacillus acidophilus (50%)
2 1693 bp 67.57 0.18 71.23
A1-16-all-fractions_k255_1340860
Species: Arthrobacter arilaitensis (50%)
2 2224 bp 67.18 1.01 99.82
A1-16-all-fractions_k255_3587176
Species: Streptomyces fradiae (50%)
2 1956 bp 74.18 4.37 97.09
A1-16-all-fractions_k255_36195
Species: Streptomyces hygroscopicus (50%)
2 2260 bp 69.03 1.33 74.60
A1-16-all-fractions_k255_37174
Species: Catenulispora acidiphila (50%)
2 2342 bp 66.87 0.51 90.05
A1-16-all-fractions_k255_4768441
Species: Cellulomonas fimi (50%)
2 1683 bp 71.66 0.71 95.54
A1-16-all-fractions_k255_4785859
Species: Conexibacter woesei (100%)
2 2262 bp 71.26 0.20 100.00
A1-16-all-fractions_k255_1376584
Species: Nocardia cyriacigeorgica (50%)
2 1661 bp 68.99 0.27 93.20
A1-16-all-fractions_k255_3616268
Species: Thermomonospora curvata (50%)
2 1555 bp 71.51 0.58 100.13
A1-16-all-fractions_k255_4812141
Species: Thermomonospora curvata (50%)
2 2840 bp 73.38 0.53 90.21
A1-16-all-fractions_k255_2540827 2 1833 bp 71.03 1.64 78.23
A1-16-all-fractions_k255_3647618
Species: Thermomonospora curvata (50%)
2 1987 bp 70.91 0.30 96.18
A1-16-all-fractions_k255_3647964
Species: Amycolatopsis vancoresmycina (50%)
2 5088 bp 72.54 0.50 81.19
Displaying items 951-1000 of 1126 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.