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2013_40cm_scaffold_1

Search features with annotation key words

Displaying items 31-60 of 668 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_1_31
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31427..32092)
DNA (666bp) protein (222aa)
ABC-type transport system involved in resistance to organic solvent, periplasmic component id=1840058 bin=GWE2_Bacteroidetes_42_39 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
2013_40cm_scaffold_1_32
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32156..32911)
DNA (756bp) protein (252aa)
ABC transporter related protein id=3980291 bin=GWF2_Bacteroidetes_42_66 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
ABC transporter; K02065 putative ABC transport system ATP-binding protein Tax=GWE2_Bacteroidetes_42_39_curated
ABC-type transport system involved in resistance to organic solvents, ATPase component
2013_40cm_scaffold_1_33
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32908..33741)
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=2054844 bin=GWE2_Bacteroidetes_41_25 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWA2_Bacteroidetes_40_15_curated
ABC-type transport system, permease component
2013_40cm_scaffold_1_34
unknown

Not on your lists

34064..34225
DNA (162bp) protein (54aa)

This feature has no annotations

2013_40cm_scaffold_1_35
unknown

Not on your lists

34329..34451
DNA (123bp) protein (41aa)

This feature has no annotations

2013_40cm_scaffold_1_36
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34619..35086
DNA (468bp) protein (156aa)
membrane protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003465434
Strain DSM 12611 Contig02, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54709.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
putative small integral membrane protein
2013_40cm_scaffold_1_37
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35131..35349
DNA (219bp) protein (73aa)
Putative uncharacterized protein id=4100134 bin=GWF2_Bacteroidetes_42_66 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
2013_40cm_scaffold_1_38
unknown

Not on your lists

35854..36099
DNA (246bp) protein (82aa)

This feature has no annotations

2013_40cm_scaffold_1_39
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36141..36371)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZ39_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGD68993.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aqu
2013_40cm_scaffold_1_40
unknown

Not on your lists

comp(36569..36805)
DNA (237bp) protein (79aa)

This feature has no annotations

2013_40cm_scaffold_1_41
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36924..37517)
DNA (594bp) protein (198aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacter
Ferroxidase n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X8N4_FLACA
ferroxidase
2013_40cm_scaffold_1_42
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(37739..38167)
DNA (429bp) protein (143aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THR6_NIAKG
hypothetical protein Tax=RBG_16_Zixibacteria_50_21_curated
Activator of Hsp90 ATPase 1 family protein
2013_40cm_scaffold_1_43
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38180..38623)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K593_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK95699.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
2013_40cm_scaffold_1_44
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38610..38810)
DNA (201bp) protein (67aa)
Uncharacterized protein id=2067957 bin=GWE2_Bacteroidetes_42_39 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein; K09165 hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
dodecin
2013_40cm_scaffold_1_45
unknown

Not on your lists

comp(38797..39063)
DNA (267bp) protein (89aa)

This feature has no annotations

2013_40cm_scaffold_1_46
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(39070..39576)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003666597
PEBP family protein
PEBP family protein {ECO:0000313|EMBL:ADI73657.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium eves
2013_40cm_scaffold_1_47
unknown

Not on your lists

comp(39656..40087)
DNA (432bp) protein (144aa)

This feature has no annotations

2013_40cm_scaffold_1_48
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40130..40516)
DNA (387bp) protein (129aa)
Heat shock protein Hsp20 id=4468709 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
heat shock protein Hsp20
2013_40cm_scaffold_1_49
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(40859..41494)
DNA (636bp) protein (212aa)
orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Orotate phosphoribosyltransferase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VS13_9SPHI
orotate phosphoribosyltransferase
2013_40cm_scaffold_1_50
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41997..43508)
DNA (1512bp) protein (504aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
Putative uncharacterized protein id=4655190 bin=GWF2_Bacteroidetes_35_48 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
2013_40cm_scaffold_1_51
Acinetobacter guillouiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43735..44370
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Acinetobacter guillouiae RepID=N8TJP1_ACIGI
Uncharacterized protein {ECO:0000313|EMBL:ENU58757.1}; TaxID=1217655 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter guil
MgtC/SapB transporter
2013_40cm_scaffold_1_52
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44380..45639)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382C2F5
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KIC94177.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavi
DNA mismatch repair protein MutT
2013_40cm_scaffold_1_53
Halomonas hydrothermalis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45680..46327)
DNA (648bp) protein (216aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Halomonas stevensii RepID=UPI000367C708
2013_40cm_scaffold_1_54
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(46408..46875)
DNA (468bp) protein (156aa)
bcp; bacterioferritin comigratory protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=3263480 bin=GWF2_Bacteroidetes_35_48 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
peroxiredoxin
2013_40cm_scaffold_1_55
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

47082..47645
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW25_PEDHD
putative transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
hypothetical protein
2013_40cm_scaffold_1_trna_1
unknown

Not on your lists

47710..47784
DNA (75bp)
transferRNA
2013_40cm_scaffold_1_56
Niabella aurantiaca, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47940..48590
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D0F78
2013_40cm_scaffold_1_57
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

48583..49035
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 863 str. F0517 RepID=U2ASR1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CEN40269.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynod
2013_40cm_scaffold_1_58
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49045..49533)
DNA (489bp) protein (163aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Halis
phosphodiesterase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D95B
phosphodiesterase
2013_40cm_scaffold_1_59
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(49560..50336)
DNA (777bp) protein (259aa)
Tetratricopeptide repeat protein id=2298900 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
tetratricopeptide repeat protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
Displaying items 31-60 of 668 in total

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