ggKbase home page

2013_40cm_scaffold_1

Search features with annotation key words

Displaying items 61-90 of 668 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_1_60
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(50339..52171)
DNA (1833bp) protein (611aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Putative uncharacterized protein id=4854721 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
BatD
2013_40cm_scaffold_1_61
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(52186..52851)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B40C95
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Tetratricopeptide repeat protein
2013_40cm_scaffold_1_62
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52848..53915)
DNA (1068bp) protein (356aa)
von Willebrand factor type A id=1933805 bin=GWB2_Bacteroidetes_32_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
von Willebrand factor A; K07114 uncharacterized protein Tax=GWD2_Bacteroidetes_33_33_curated
von Willebrand factor A
2013_40cm_scaffold_1_63
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53915..54904)
DNA (990bp) protein (330aa)
Aerotolerance protein BatA id=3839829 bin=GWF2_Bacteroidetes_41_31 species=uncultured bacterium Rlip1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
von Willebrand factor A; K07114 uncharacterized protein Tax=GWF2_Bacteroidetes_41_31_curated
vWA domain-containing protein
2013_40cm_scaffold_1_64
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(54901..55869)
DNA (969bp) protein (323aa)
hypothetical protein Tax=CG_Bacteroid_01
Putative uncharacterized protein id=4534612 bin=GWA2_Ignavibacteria-rel_35_8 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
2013_40cm_scaffold_1_65
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55871..56746)
DNA (876bp) protein (292aa)
hypothetical protein AtheD1_14505 id=4263549 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
2013_40cm_scaffold_1_66
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(56828..57814)
DNA (987bp) protein (329aa)
ATPase AAA; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
ATPase associated with various cellular activities AAA_3 id=1708001 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
ATPase AAA
2013_40cm_scaffold_1_67
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


58009..58263
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=2 Tax=Bacteroides RepID=R6S5F0_9BACE
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="B
rpsT; 30S ribosomal protein S20
2013_40cm_scaffold_1_68
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

58370..59062
DNA (693bp) protein (231aa)
DNA repair protein RadC n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EWH8_EMTOG
DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
DNA repair protein RadC
2013_40cm_scaffold_1_69
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

59153..60457
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U3E6_9FLAO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein
2013_40cm_scaffold_1_70
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

60473..61387
DNA (915bp) protein (305aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Putative uncharacterized protein id=4216970 bin=GWF2_Bacteroidetes_29_10 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
2013_40cm_scaffold_1_71
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

61390..62037
DNA (648bp) protein (216aa)
uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=CG_Bacteroid_01
Uracil phosphoribosyltransferase id=4224125 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
uracil phosphoribosyltransferase
2013_40cm_scaffold_1_72
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

62106..62708
DNA (603bp) protein (201aa)
hypothetical protein MsalJ2_11307 id=1797296 bin=GWE2_Bacteroidetes_29_8 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein MsalJ2_11307 Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
2013_40cm_scaffold_1_73
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

62705..63409
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI0003664FB6
had superfamily (subfamily ia) hydrolase, tigr02254; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
HAD family hydrolase
2013_40cm_scaffold_1_74
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(63392..64000)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036E1F89
ACP phosphodiesterase {ECO:0000313|EMBL:KIF33554.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
acyl carrier protein phosphodiesterase
2013_40cm_scaffold_1_75

Not on your lists

64053..64544
DNA (492bp) protein (164aa)
kazal domain protein n=1 Tax=Pontibacter roseus RepID=UPI000375989B
Marine sediment metagenome DNA, contig: S03H2_L00998 {ECO:0000313|EMBL:GAH44745.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
2013_40cm_scaffold_1_76
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(64534..65286)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034CF8C2
hypothetical protein
CRISPR-associated protein, Cas6 family {ECO:0000313|EMBL:ABG59481.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsoni
2013_40cm_scaffold_1_77
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

65469..66173
DNA (705bp) protein (235aa)
LOG family protein yvdD n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NZ43_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHM61627.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
2013_40cm_scaffold_1_78
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66170..68314)
DNA (2145bp) protein (715aa)
Tetratricopeptide TPR_2 repeat-containing protein id=4582048 bin=GWF2_Bacteroidetes_35_48 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
hypothetical protein
2013_40cm_scaffold_1_79
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(68343..69803)
DNA (1461bp) protein (487aa)
membrane protein Tax=CG_Bacteroid_01
Membrane protein involved in the export of O-antigen and teichoic acid id=3843132 bin=GWF2_Bacteroidetes_33_38 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
2013_40cm_scaffold_1_80
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

69917..71566
DNA (1650bp) protein (550aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Putative uncharacterized protein id=4405028 bin=GWF2_Bacteroidetes_43_63 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
2013_40cm_scaffold_1_81
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

71566..72852
DNA (1287bp) protein (429aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
2013_40cm_scaffold_1_82
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

72861..73673
DNA (813bp) protein (271aa)
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KJF45418.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Dr
2-dehydro-3-deoxyphosphogluconate aldolase
3-deoxy-8-phosphooctulonate synthase id=1804777 bin=GWE2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
2013_40cm_scaffold_1_83
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

73670..75163
DNA (1494bp) protein (498aa)
Lipoprotein, putative n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0C1_DICTD
lipoprotein Tax=RBG_13_OP8X_37_8_curated
lipoprotein
2013_40cm_scaffold_1_84
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

75160..76467
DNA (1308bp) protein (436aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Putative uncharacterized protein id=1774918 bin=GWE2_Bacteroidetes_42_24 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
2013_40cm_scaffold_1_85
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

76481..77578
DNA (1098bp) protein (366aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDI6_9SPHI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
NGG1p interacting factor 3 protein, NIF3
2013_40cm_scaffold_1_86
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

77582..78598
DNA (1017bp) protein (339aa)
Zn-ribbon protein, possibly nucleic acid-binding protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX59_SOLCM
hypothetical protein; K07164 Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Zn-ribbon protein, possibly nucleic acid-binding protein
2013_40cm_scaffold_1_87
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

78647..80161
DNA (1515bp) protein (505aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S826_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:KHJ38581.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter gluco
hypothetical protein
2013_40cm_scaffold_1_88
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(80166..82349)
DNA (2184bp) protein (728aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FCE25
Uncharacterized protein {ECO:0000313|EMBL:GAL84871.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
2013_40cm_scaffold_1_89
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

82469..83629
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2Q9_DEHLB
hypothetical protein; K09760 DNA recombination protein RmuC Tax=CG_Omnitr_02
hypothetical protein
Displaying items 61-90 of 668 in total

View Taxonomy