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berkeley_reactor_200306_planktonic_scaffold_23420_232

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 277818..279452

Top 3 Functional Annotations

Value Algorithm Source
RDD domain containing protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUF8_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 553.0
  • Bit_score: 270
  • Evalue 2.10e-69
RDD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 553.0
  • Bit_score: 270
  • Evalue 5.90e-70
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 512.0
  • Bit_score: 321
  • Evalue 1.90e-84

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1635
ATGAAAATCAGAAATTCCATCCTCCTGGCACTTTGTGTGGGAGCTCTCTTTTGTCCGTGGTCGCTGCCTTCGGTCCTGGCGCTGGACACCAACCATTTCTCGAATGATCTGGCGGCCACCGGCCCGGTCGAAGTGGTTTCCAACCCGCCGCCGGCCGGGATCACCGACGTGGTGGTCACCCATCCGCCGGTGGCCGCCAATCACCGGGAAAATCCGCAGCCCATCGTGCTGTTCGGACAGGATGCGGAACTGAAAGCCGGCGACGCGGCGGAAGCCGTGGTGGTGATCGGCGGTTCGGCGACGATTCACGGCCGGGTGCGCGAAGCCGTGGTGGTGATCGGCGGCAATGCGGATGTGGATGGCGAGGTCGGCCAGGCCGTGGTGGCGGTGGGCGGCGATGTTCACTTGAACGCCGGCGCCGCCGTGCGCCAGGACGCCGTCGCGGTGCTGGGCTCGGTTTCCGTGGAGCCGGGGGTGACGGTGAAAGGCAACGCGGTGGCCGTTGGCGGCAAACTGAACCTGGCGGATGGCGCGGTGGTCAAAGGCGACAAGGTGAACGTGGGGCTGCCCAGGCCGTTCAGCAATGTCGAGTGGCTGCGGAACTGGTTCCGCTATTGCGTGTTTGAGCTGCGTCCGCTGGCCTTTCCGTTTCAAGTGGGTTTCGTGTGGGTGATTGCAGGCATCTTCCTGCTCATCTATCTGTTCATCGCGGCGGTGTTTTCGCGTTCGATTCAAAAAAGCGTGGCGGATCTGGATCACCGGCCGGCCACCATTTTTCTCGTGGGCCTGCTGGCGAAGCTGATCGTGCCTTTTGTCTATTTGATTTTGCTGGCGACCGGCCTGGGAATCATCGTCATTCCGCTTATCGGCGTGACCGTCTGGCTATTTTCCCTTTACGGCAAAGTGGCGGTTCTCGAATGGCTGGGCTTCAAGCTCGGACGCTTCTTTGGCGGCGGAATTCAAAAGCCGCTGGCGGCCCTGCTGCTGGGCGCGGTCGTAATCATGCTGCTTTATCTGATCCCGGTGATTGGTTTTCTGGCGCATATAATTTTCGGGATCTGGGGATTGGGCAGCGGCGTCGTGTCGGTGTTTGGCCGGGCCCGGCGGGAAACGCCGCCGGCGCCGGAACCACCGGCCGGCGCAATGCCGTCAAGCGTGGCGCCGCCTGCGGCCGCCCCGCCGGCACCGCCGGTGATCCCGGACGAGAACCTCCCGCCGGCTTCCGCCGCGGCACCGGTGGCCGGGGACATCACGTCCTATCCGAAAGCCAGCCTGTGGGAAAGGCTGCTGGCCTCGCTGCTGGACATCATTTTACTGGGGCTCGTCATCGGCTTTGTTCACTTGGGACGATATACACTGGTCATCGCCCTCGCGTATTTCACGCTCATGTGGACGTGGCGCGGCACCAGCATTGGCGGTCTGCTGTTCAAATTAAAAGTGGTGCGGACCGACGGCCGGCCGTTGACATTTTTGGTGGCCCTGGTGCGCGGGCTGGCGGCGGCGTTTTCGGTCATCGTTCTCTTTCTGGGATTTCTTTGGATCGCCTGGGACCAGGACAAACAGGGCTGGCACGATAAAATCGCGGGAACCGCGGTCGTGCGGCTGCCGCAGTCGGCGCCGCTGGTGTGCTTGTGA
PROTEIN sequence
Length: 545
MKIRNSILLALCVGALFCPWSLPSVLALDTNHFSNDLAATGPVEVVSNPPPAGITDVVVTHPPVAANHRENPQPIVLFGQDAELKAGDAAEAVVVIGGSATIHGRVREAVVVIGGNADVDGEVGQAVVAVGGDVHLNAGAAVRQDAVAVLGSVSVEPGVTVKGNAVAVGGKLNLADGAVVKGDKVNVGLPRPFSNVEWLRNWFRYCVFELRPLAFPFQVGFVWVIAGIFLLIYLFIAAVFSRSIQKSVADLDHRPATIFLVGLLAKLIVPFVYLILLATGLGIIVIPLIGVTVWLFSLYGKVAVLEWLGFKLGRFFGGGIQKPLAALLLGAVVIMLLYLIPVIGFLAHIIFGIWGLGSGVVSVFGRARRETPPAPEPPAGAMPSSVAPPAAAPPAPPVIPDENLPPASAAAPVAGDITSYPKASLWERLLASLLDIILLGLVIGFVHLGRYTLVIALAYFTLMWTWRGTSIGGLLFKLKVVRTDGRPLTFLVALVRGLAAAFSVIVLFLGFLWIAWDQDKQGWHDKIAGTAVVRLPQSAPLVCL*