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berkeley_reactor_200306_planktonic_scaffold_37596_37

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 43201..43578

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK34_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 123.0
  • Bit_score: 164
  • Evalue 3.70e-38
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 123.0
  • Bit_score: 164
  • Evalue 5.20e-38
iojap-like ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 112.0
  • Bit_score: 114
  • Evalue 1.30e-23

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 378
ATGGATTCAAAGAAACTGGCGTTACTCTGCCGCGAACTGGCCGACAACAAGAAGGCGGAAAACCTCATCGTGCTCGACGTGCGCAAGCTGTCGAGCGTGACGGATTACTTCGTGCTCGCCTCCGGCACCAGCCAGCCACACCTGCGCGCGATTGTCGAGGAAATCACCGGCAAGTTGAAGGATGACCACGCGTTGCGCCCGGCGCGCTCGGAAGGCTACAAGAGCGGCACCTGGGTGGTGCTGGACTACTTTGACGTGATTGTTCACATCATGCATGCCGACACGCGGGCACACTACGACCTGGAAAGTCTCTGGGGCGACGCCAAGCGGGTGACTCCGCCGAAACCGCGCAAGAAAAAAACTCCGGCGGAGAAATAA
PROTEIN sequence
Length: 126
MDSKKLALLCRELADNKKAENLIVLDVRKLSSVTDYFVLASGTSQPHLRAIVEEITGKLKDDHALRPARSEGYKSGTWVVLDYFDVIVHIMHADTRAHYDLESLWGDAKRVTPPKPRKKKTPAEK*