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berkeley_reactor_200306_planktonic_scaffold_37596_38

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(43607..43936)

Top 3 Functional Annotations

Value Algorithm Source
PUR-alpha/beta/gamma DNA/RNA-binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK33_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 106.0
  • Bit_score: 138
  • Evalue 2.50e-30
PUR-alpha/beta/gamma DNA/RNA-binding {ECO:0000313|EMBL:EEF59856.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 106.0
  • Bit_score: 138
  • Evalue 3.50e-30
PurA family ssDNA and RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 63.0
  • Bit_score: 81
  • Evalue 1.00e-13

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 330
ATGATATCGAACGAACGTCCATCACCTTATGGTCGCAGGCCTTACCAGAGTCAGGGCTACGGCGCGTCCAAATACCATCAGCAACCTCGTCCGCCGGTTCAGGAAGACACCCTGAAAACCGGCGAAATCCAGATCGAACGGAAAAACTTTGTTTTCACGCTCAAGGAAAACGTGCGCGGGCGGTTTCTGCGCATCACCGAGGATGTCGGTGGCCGGCGCGACACCATCATTGTGCCTTCCACGGGACTGGCGGAATTCAAGAAGCTGGTTGACGAAATGGTCAAGGCCTCCGGGGAAATCCCCGAGAAACAGCCGGACCCCGAAGCGTGA
PROTEIN sequence
Length: 110
MISNERPSPYGRRPYQSQGYGASKYHQQPRPPVQEDTLKTGEIQIERKNFVFTLKENVRGRFLRITEDVGGRRDTIIVPSTGLAEFKKLVDEMVKASGEIPEKQPDPEA*