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berkeley_reactor_200306_planktonic_scaffold_78559_54

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(55690..56403)

Top 3 Functional Annotations

Value Algorithm Source
Riboflavin synthase, alpha subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNY9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 209.0
  • Bit_score: 303
  • Evalue 9.70e-80
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EEF58455.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 209.0
  • Bit_score: 303
  • Evalue 1.40e-79
riboflavin synthase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 200.0
  • Bit_score: 212
  • Evalue 8.40e-53

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 714
ATGAACCGGGAGCGGCACGCCGGTTCGCCGCGGGCAACGCGCGGTGCTGGATTGCCAAAACACGGCTCGACGCTGGTTGCGTTCGGGTTTAGATTTCCCGCAATGTTTACCGGCATTGTCGAAGAAGCGGGCGTCATCGAGAAAATCACCCCGACCAAAAACTCCATTGAAATGACCGTGCGCGCCGGCGTCTGCGGACGCGGCGTGAAAATCGGCGACAGCGTCGCGGTCAACGGCTGCTGTCTCACGGCGGTGAAAATTACCGCCAAAGGCAAATCCAAGTTGATCCAGTTCGACCTGCTCCAGGAAAGCTGGCGGCGCACCAACTTCCAGTTCGCCAGGCCCGGTTCACTCGTGAATCTCGAACGTTCGCTCCGCGCCAACGGCGAGCTGGGCGGACATTTCGTGACCGGCCACATTGACGGTCTCGGCAAAATCATCCGCTGGGAACGCGCCGGCAAGGATCACGTGCTCGATATCGCCGCGCCGGCGGAGGTGATGAAGTATCTGGTCTTCAAAGGTTCCGTGGCCGTGGACGGCATCAGTCTCACCGTGGCCGCCGTGCAGAAGAAAAACTTCCGTCTCTGGATCATTCCGCATACCCACGAAGTCACCGCCTTGCGGGAACGACAGGTGGGCGACGCCGTGAATCTGGAAGCCGATTTGCTGGGCAAATACGTCGAAAAATTTCTGTCCGCCCGCCGCAAAAAGTAA
PROTEIN sequence
Length: 238
MNRERHAGSPRATRGAGLPKHGSTLVAFGFRFPAMFTGIVEEAGVIEKITPTKNSIEMTVRAGVCGRGVKIGDSVAVNGCCLTAVKITAKGKSKLIQFDLLQESWRRTNFQFARPGSLVNLERSLRANGELGGHFVTGHIDGLGKIIRWERAGKDHVLDIAAPAEVMKYLVFKGSVAVDGISLTVAAVQKKNFRLWIIPHTHEVTALRERQVGDAVNLEADLLGKYVEKFLSARRKK*