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berkeley_reactor_200306_planktonic_scaffold_78559_55

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(56431..57642)

Top 3 Functional Annotations

Value Algorithm Source
ribD; putative 5-amino-6-(5-phosphoribosylamino) uracil reductase / diaminohydroxyphosphoribosylaminopyrimi dine deaminase (EC:1.1.1.193 3.5.4.26) similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 401.0
  • Bit_score: 334
  • Evalue 4.20e-89
Riboflavin biosynthesis protein RibD n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNZ0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 392.0
  • Bit_score: 494
  • Evalue 6.60e-137
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 392.0
  • Bit_score: 494
  • Evalue 9.30e-137

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1212
ATGCGCGGGATGTCTGAGCTTCAATTCATGCGGCTGGCGCTTCGCCTCGCCCGGCGCGGTTACGGCACCACCTCGCCCAATCCCATGGTTGGCGCCGTGCTGGTGAATGGCGGCAAAATTATCGGGCGCGGCTGGCACCAGCGCGCCGGCGGACCGCACGCGGAAATCGCGGCGCTGCGCGCGGCGCAACGGCGCGGCAAGTCACCGCGCGGCGCGACGCTGTATGTCACGTTGGAACCCTGCAGCACGCATGGACGCACGCCGGCCTGCACGGATGCCATTGTCAGCGCCGGCATCCGGCGCGTGGTGGTGGGCACAACCGATCCGAATCCGCGGCACGCGGGAAAAGCGTTTCCGATTTTGCAGCGGGCCGGGATTGCGGTTGCCTCGATGGGTGACGCATCCCGGAGCGGTTCGCGAGGACGCCTGTCCCGCCAGCACATGGCGGACGAATGCGCAGAACTGAACGAGGCATTCAATCATTGGATTGTGCATCGCACGCCGTTCATCACCGTGAAAGCCGCCATGACCTTGGATGGAAAAATCGCCACGGCCGGCGGTGAATCGAAATGGATCACCGGTGAAAAGGCCCGGCGATATGGGATGAGATTGCGGCAGGGTGCGGATGCCGTTCTGGTGGGGGTAAACACCGTCCTGGCCGATGATCCGAGCCTGACGGTGCGGACGGGAAGTAAAGCCCGGGGCCCGCAGAGGACCAGGCCATTGCGGCGCATCGTGCTGGATTCACAGGCGCGAACGCCACTGGACGCCAAGGTCGTCTGCGACGAATTCGCCGGTTTGACCACCGTTGTCGTCGGCAAACACGCCCCCAAAAAACGGGTCGCCGCTCTGGCTCGCCGGGTGAAGGTGCTGGTGGCGCCGGTGCAAACGGCGGGGCGGGCGTCCTCGCCAGCCGGCGGGAGCAACCAGATCAACTTGAAATGGCTTTTGAAAAAATTGGGCGCGGAGCATGTCACCTGCCTGCTGGTCGAAGGCGGCGGTGAAGTCAACGCCTCGTTTCTGCTGGGCGGCTGGGCGCAGCGCGTGGCGTTCTTTTACGCGCCCAAAATTCTGGGCGGCCGCGCAGCGCGCAAGGCGGTGGCGGGCGAAGGCGCGCGAAATTTGCGCGAGCTGGTCCAACTGCACGACCTCCAATGGAAACAATTGGGGGCGGATTTGCTGCTCACGGCGAAAGTTTCTGGCCGGCTTTGA
PROTEIN sequence
Length: 404
MRGMSELQFMRLALRLARRGYGTTSPNPMVGAVLVNGGKIIGRGWHQRAGGPHAEIAALRAAQRRGKSPRGATLYVTLEPCSTHGRTPACTDAIVSAGIRRVVVGTTDPNPRHAGKAFPILQRAGIAVASMGDASRSGSRGRLSRQHMADECAELNEAFNHWIVHRTPFITVKAAMTLDGKIATAGGESKWITGEKARRYGMRLRQGADAVLVGVNTVLADDPSLTVRTGSKARGPQRTRPLRRIVLDSQARTPLDAKVVCDEFAGLTTVVVGKHAPKKRVAALARRVKVLVAPVQTAGRASSPAGGSNQINLKWLLKKLGAEHVTCLLVEGGGEVNASFLLGGWAQRVAFFYAPKILGGRAARKAVAGEGARNLRELVQLHDLQWKQLGADLLLTAKVSGRL*