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berkeley_reactor_200306_planktonic_scaffold_78559_173

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 205834..206862

Top 3 Functional Annotations

Value Algorithm Source
Cell shape determining protein, MreB/Mrl family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG13_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 341.0
  • Bit_score: 625
  • Evalue 2.80e-176
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EEF61175.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 341.0
  • Bit_score: 625
  • Evalue 3.90e-176
mreB; rod shape-determining protein MreB similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 343.0
  • Bit_score: 496
  • Evalue 3.20e-138

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1029
ATGCTCGAGCAATTCAAAAGCCTGTTTTCCAACGATATTGGAATAGATCTGGGCACCGCCAATTCCCTCGTCTATGTGCGGGACCGCGGAATCGTCCTGCGCGAACCTTCGGTGGTGGCCATTCAGGCCGGCACCACGAATGTGCTGGCGGTCGGTGACGAAGCCAAACGCATGCTGGGCCGCACGCCCGGCAACATCGTGGCCATCCGCCCGATGAAAGACGGCGTGATCGCCGACTTCGAAATCACCGAGGCCATGCTGCGGCATTTCATCCAGAAGGTTCACCACCGCAAACTGATCGCGCCCCGCGTGGTCGTGGCGGTGCCTTCGGGCATTACCGAAGTGGAAAAACGGGCGGTGAAGGATTCCGCCACCCATGCCGGCGCGCGTGAGGTGTATTTGATCGAGCAGCCGATGGCTTCGGCCATTGGCGTGGGTCTGCCGGTGCATGAGCCGGCGGGCAACATGATTGTGGACATCGGCGGCGGGACATGCGAAATCGCCATCATCTCCCTCGCCGGCATCGTCTTCAGCCGCAGCCTGCGGGTGGGCGGGGATGAACTGGATTCCACGATCGTCGCGCACATGAAGCGCGCCTACAACCTGATGATAGGTGAACGCACTGCGGAAGAAATCAAGATTCGCATCGGCTCCGCCTTTCCGTTGGAAGAAGAATTGACGATGGACGTGAAAGGCCGGGACTTGAGTTCCGGTCTGCCCAAAACGTTGACGATTCGCTCCGAGGAAATCCGCGAGGCTTTGCAGGAACCGCTTTCGAGCATTCTCGAATCCGTCCGGATCACATTGGAACGCTGCCCCCCGGAACTCGCCGCCGATCTGGTAGATCGGGGCCTGGTGATGGCTGGTGGTGGTTCCTTGATTCGCGGCATTGACCGACTCGTGGCCGGCGAAACCGGCCTGCCCGTGCATCTCGCCGACGACCCGATGAGCGCCGTCGCCGAGGGAACGGGCCGTGTATTGCAGGAAATCGAATTCCTCAAACGCGTCGCCACCAACGCCAAATATTAA
PROTEIN sequence
Length: 343
MLEQFKSLFSNDIGIDLGTANSLVYVRDRGIVLREPSVVAIQAGTTNVLAVGDEAKRMLGRTPGNIVAIRPMKDGVIADFEITEAMLRHFIQKVHHRKLIAPRVVVAVPSGITEVEKRAVKDSATHAGAREVYLIEQPMASAIGVGLPVHEPAGNMIVDIGGGTCEIAIISLAGIVFSRSLRVGGDELDSTIVAHMKRAYNLMIGERTAEEIKIRIGSAFPLEEELTMDVKGRDLSSGLPKTLTIRSEEIREALQEPLSSILESVRITLERCPPELAADLVDRGLVMAGGGSLIRGIDRLVAGETGLPVHLADDPMSAVAEGTGRVLQEIEFLKRVATNAKY*