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berkeley_reactor_200306_planktonic_scaffold_78559_172

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(203437..205524)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:EEF61751.1}; EC=5.99.1.3 {ECO:0000313|EMBL:EEF61751.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 702.0
  • Bit_score: 1035
  • Evalue 0.0
DNA topoisomerase (EC:5.99.1.3) similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 641.0
  • Bit_score: 621
  • Evalue 1.80e-175
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEN7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 702.0
  • Bit_score: 1035
  • Evalue 0.0

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2088
ATGTCAGCCAAACGCAAGAATAATTCAGACCAGCAGGAGCCGGGTGCCGGGGGAATGCCACCGGCGCCGGCCGGGAACGGCGCGGACCACATCGTCGCCGAGGCCGTGGAAACCGTGGCGCACAAGCCGTTCGATCCCAAAAACACCAAGGCGGGGTTGCACACGCGCGTGGACCGCGGTTTTCTGGATTACGCCAGCTACGTCATCCGCGACCGCGCGATTCCCAATCTGGCGGACGGTTTGAAACCCGTGCAGCGGCGCATTCTCTGGGCGCTGCACGAAAAGGACGACGGCCGCTTCATCAAGGTGGCCAACGTCGTTGGCCACACGATGCAATATCATCCGCACGGCGACGCCTCCATTGGCGACGCGCTCGTGGTGCTGGCAAACAAGCGTTATCTCATCGAAGGCCAGGGGAATTTCGGCAACATTTTCACCGGCGACCCGGCCGCCGCGCCCCGTTACATCGAGTGTCGCCTGACTGATCTGGCGCGCACGGAAGTGTTCAACGACACCATCACCGATTTTATCGCCAGTTACGACGGGCGCAACCAGGAGCCCGTCACCCTGCCCTGCAAACTGCCGCTCACCCTCATGCTCGGCACCGAAGGCATCGCCGTCGGCTTGAGCGCGCGTATTTTGCCGCACAATTTCCCGGAACTGATCGAGGCGCAAATTGCCATTCTCAAGCATCAGCCGTTCAAATGCCTGCCGGATTTTCCGACCGGCGGCCTGATGGACGCGCGCGATTATCAGGACGGCAAAGGCTCCGTCAAAGTCCGCGCCCGCATCAAGGCCAAGGACGACAACACCGTCGTCATCACGGAAATTCCGCCAACGACCACGACCGATTCGTTGATCGGTTCCATCGAGGACGCCGTCCGCAAAGGCAAGCTCAAGGTCAAATCCATCAACGATTTCACCTCGGAAAATGTTGAAATCGAAATCAAATGTCCGTCCGGCGTCAGCGCGGACAAGTTGATTGACGCGCTTTACGCCTTCACCGGCTGCGAGGTTTCCATTTCCAGCCGCATCGTCGTCATCAAGGACAATCGGCCGGTGGAAATGACCGTCAGCGACGTGCTGCGCGAAAACACCGGCCAGCTCGTCGCCATCCTCAAGCGCGAACTGGAACTCAGCGAGAAAAACCTGCTCGACGAACTTCATTATCGCACGCTGGAACGCATTTTCATTGAGGAACGCATCTACAAAAAAATCGAGCAGTGCAAAACGAACGAAGCCGTCATCGCCGCCGTTTATGACGGATTCAAGCCGTTTAAGAAGGAATTGATCCGCGACATCGTGGACGCCGATGTGGAGAAACTGTTGCAGGTGCGCATCCGCCGGATTTCGCTCTTCGACATCAACAAGCACCGGCAGGAGATGGAGAAGACCCGGGCGGAACTGGACGAAACCCGCAAAAATTTAAAGGCCCTGACCAAATACGTCATCAGCCATCTCGAAGCGTTGCTGGCGAAATACGGCAAACAATATCCGCGCCTCACCACCAAGTCCGCGCGCCACGAGGAAGTGGACGTGAAAGCCGTGGCATTCAAGGCGTTCAAAGTCAGCTACGACCGTGAAACCGGCTACGTGGGCTACAAGGTTTCCGGCGACGAATTCAAGCTGGAATGCACCAAGTTCGACAAGCTGCTGCTGGTGTTCCGCGACGGCACCTACAAGGTGACCGAACTGCCGGAGAAATTGTTCGTCGGCCAGGAACTGTTCTACTGCGGCCTGCCGGAGCGCGACCGCGTGTTCACCTGCGCCTACACGGATCGCAACGCTAGCTATCTGAAGCGGTTCACGTTTGGCGGCACGATCATGAACAAGGTTTACTCGTGCATCCCGGATAAATCGCGGATTCTGTATTTTGCGCCGGAAACGCCCAAGCTGCTCTACGTGCGCTACAAACCCGCGCCGCACCAGAAGGTCAGCCAGCAAACCTGCGATCCGTCCCTGGTGGAGGTAAAAACGCCCAAGACCCGCGGCCGCCAGATTTCCATCAAGGACATCTCGTCCGTCACCGCGGAACCGACGCGCGGCTGGGACGAGCAGGCACCGACGACGAAAATTGTGTTTGCCTAG
PROTEIN sequence
Length: 696
MSAKRKNNSDQQEPGAGGMPPAPAGNGADHIVAEAVETVAHKPFDPKNTKAGLHTRVDRGFLDYASYVIRDRAIPNLADGLKPVQRRILWALHEKDDGRFIKVANVVGHTMQYHPHGDASIGDALVVLANKRYLIEGQGNFGNIFTGDPAAAPRYIECRLTDLARTEVFNDTITDFIASYDGRNQEPVTLPCKLPLTLMLGTEGIAVGLSARILPHNFPELIEAQIAILKHQPFKCLPDFPTGGLMDARDYQDGKGSVKVRARIKAKDDNTVVITEIPPTTTTDSLIGSIEDAVRKGKLKVKSINDFTSENVEIEIKCPSGVSADKLIDALYAFTGCEVSISSRIVVIKDNRPVEMTVSDVLRENTGQLVAILKRELELSEKNLLDELHYRTLERIFIEERIYKKIEQCKTNEAVIAAVYDGFKPFKKELIRDIVDADVEKLLQVRIRRISLFDINKHRQEMEKTRAELDETRKNLKALTKYVISHLEALLAKYGKQYPRLTTKSARHEEVDVKAVAFKAFKVSYDRETGYVGYKVSGDEFKLECTKFDKLLLVFRDGTYKVTELPEKLFVGQELFYCGLPERDRVFTCAYTDRNASYLKRFTFGGTIMNKVYSCIPDKSRILYFAPETPKLLYVRYKPAPHQKVSQQTCDPSLVEVKTPKTRGRQISIKDISSVTAEPTRGWDEQAPTTKIVFA*