ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_78559_208

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(246320..247327)

Top 3 Functional Annotations

Value Algorithm Source
PfkB domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGJ7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 335.0
  • Bit_score: 456
  • Evalue 1.30e-125
PfkB domain protein {ECO:0000313|EMBL:EEF61048.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 335.0
  • Bit_score: 456
  • Evalue 1.80e-125
ribokinase-like domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 303.0
  • Bit_score: 287
  • Evalue 4.90e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1008
ATGAGCACCAACAAAATTTCCGCGAAACGCGCCCGGCAGATTCTGTCGGCCGCGCCGCAAAGCCGCATTCTCGTCGTTGGCGACGTGATGCTGGATCAATTCATCTGGGGCGGCGTGACGCGCATTTCGCCGGAGGCGCCGGTGCCGGTGGTGGATTTTCTCAGCGAAAGCTACATGCCCGGCGGCGCGGCGAATGTCGCGCGGAATCTGGTTTCGCTGTCCGCCACGACGGAATTGTTCGGCGTCATCGGCCGCGACGATGCGGCCAGCCGCCTCCAGACGTTGCTGCGTGAACAACACATCGGCTGCGCCGGCCTGGTGAAAAACGCCGGGCGCCACACGAGCATCAAGACGCGCATCGTGGCGCATCAGCAGCAGGTGGTGCGCATTGACCGGGAAACGCGCGGCCATCTGGACGGCAAAACCACGGCGCGGTTGCTGGCGGAAATCAAAACCAAACTCGGCCGGGCGGACGCGGTCATCGTGGGCGATTACGGCAAGGGCGTGGTGACGCAGTCGTTGCTGGACGAGCTGAAAAAACTGTGCCGCGAGCGGGGCGTCTGGTTAAGCCTGGACCCGAAACCGGTTCATCATTTGGATTTGAGCGGGCTGTCGCTCATCACGCCGAACCGCAAGGAGGCGTTTGAACTGGCGGGGCTGGCGGATGAAACCCGGACCGAAAATCCCTTCGCGGATAAAAACCTGATGCGGGTGGCGGAGGAGTTGCTGGCGGAACTGCGGCCGGCGGTGATGCTCATCACGCTGGGCGAACTGGGCATGCTGCTGTGCCAGCGCGGCCAGCCGCCCGTTCACATTCCGACCGTGGCGCAGGAGGTGTTCGACGTTTCGGGTGCGGGCGACACGGTGATCGCCACGTTCACGCTGGCCGTGACGGGCGGCGCCTCGCCCCTGGAGGCGGCCATTCTTTCCAATTACGCCGCCGGCATCGTCGTCGGCAAGGTCGGCACGGCGACGACGACTCCCAACGAATTGTTGAAAAGCCTCTGA
PROTEIN sequence
Length: 336
MSTNKISAKRARQILSAAPQSRILVVGDVMLDQFIWGGVTRISPEAPVPVVDFLSESYMPGGAANVARNLVSLSATTELFGVIGRDDAASRLQTLLREQHIGCAGLVKNAGRHTSIKTRIVAHQQQVVRIDRETRGHLDGKTTARLLAEIKTKLGRADAVIVGDYGKGVVTQSLLDELKKLCRERGVWLSLDPKPVHHLDLSGLSLITPNRKEAFELAGLADETRTENPFADKNLMRVAEELLAELRPAVMLITLGELGMLLCQRGQPPVHIPTVAQEVFDVSGAGDTVIATFTLAVTGGASPLEAAILSNYAAGIVVGKVGTATTTPNELLKSL*