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berkeley_reactor_200306_planktonic_scaffold_158606_153

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 199696..201327

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF66_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 523.0
  • Bit_score: 582
  • Evalue 4.20e-163
hydrogenase-4 transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 534.0
  • Bit_score: 508
  • Evalue 1.30e-141
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 547.0
  • Bit_score: 634
  • Evalue 1.30e-178

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Taxonomy

RIFOXYC12_FULL_Lentisphaerae_60_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1632
ATGGAAGCGAGCAGCGACAACCGCTACGACACAAGATTCGACTTTGATTTCGCGTCGAGCTTATTGCTGGAGATCGCCCAGGAACGGTCCATTGAACGCCTGATGCAAAAGGCGATTGGCGCGGCGATGAGCCACCCGGAATTCGCGCGCGTTGAATTTTGGCTGATCGGCCCGGGCGACCTTTGTTCGCGTTGCGCGCAAAGGCCACGTTGCCCTGATCAAACGCGGTGCTTGCATCTGCTGGCCGCCGGTGAAAAACGGAAAGCCGGCGGAGCGCATGATTCTTCGAGCGTTTACAATTCCCAGCAGAGGATGCCGTTGGGGGTCGGCTTTGCCGGTCGGATTGCCACCAGCGGCCAAGTGATGGTGCTGAAAAATTTCAAGGACGTCCGGGACGAGTTTGTCGGCGTGGACTTGTCACGGCTGGGAAAGATTCGCCATTGCGCGGGTGCGCCCATCTCATTCCGCGGCGAAGTTCTCGGTGTGTTTGTCATTTTTTCCCATGCCAACATCACCCGGGACCGGAGTGCCTGGCACAAAATTTTTGCCGATCACATCGGCGCCGCCGTCGTCAACGCGCGCGCCTTTGAAGAAATCCAAACGCTTAAAACCGAGTTGGAACAGCAGAACGCCCTGCTCAAGGAGGAAGTCATCGAAGCCAGGGCGTTTGGCGACCTCGTCGGCCAAAGCGCGGCATTGCGGCAGGTATCAAGCCAGATTGATCTCGTCGCGCCGACCGATGCGTCCGTCCTCATTCTCGGCGAAACCGGCACCGGCAAGGAACTCGTCGCCCACGAAATTCACCGGCGCAGCAAGCGCCAGGACAAACCGTTCGTCCGCGTCAACTGCGCATCCATTCCGAAGGACTTGTATGAAAGCGAGTTTTTCGGCCATGCGCGCGGTTCGTTCACCGGCGCGCTCAAGGACCGCGCCGGACGTTTCGAGTCGGCGGAAGGCGGAACACTTTTTCTGGACGAAATCGGCGAAGTGCCGCTGGAATTGCAGAGCAAGTTGCTGCGCGTCTTGCAGGAAAAGAGCTACGAACGCGTCGGCGAAGACCGCACGCGCCACGCCGACGTGCGCATCATCGCGGCGACCAATCGTGATTTGAAAAAGGAAGCGGCGGCGGGCCGTTTTCGCGAGGATCTGTATTACCGCCTGAATGTTTTCCCGATCCAGGTCGCCCCCTTGCGCGAGCGCCGGGAGGACATTCCGCTGCTGGCGCAACATTTCATCAAGTTTTCGATGAAGGAAATGGGCTGCGCCAAACCGCGACTGACCCGCGCCGGCATCATTGAACTGCAAAGCTACGACTGGCCCGGCAACATCCGCGAACTGCGCAATGTGATCGAGCGCGCCGTCATTCTCGCGCGCGGCAAGGCTTTGGAATTCGATCTTCCATCCCATCAAGCGCCAGCCGACGTGGTTTCCCCCAAATCACGCGCCGAAGCCTCCGCCGATGCCGGCTATTTGACTGAAGCGGAAATGCTGCAACTGGAGCGCGGGAATCTGGCGAAAGTTTTGGAAAAGGCGAATTGGAAAATCAAGGGCGCGGACGGCGCGGCGGAATTGCTCGGCATAAAACCGAACACGCTGCTGGCCAGGATCAAAAAATTTGGATTGCGACGCTAA
PROTEIN sequence
Length: 544
MEASSDNRYDTRFDFDFASSLLLEIAQERSIERLMQKAIGAAMSHPEFARVEFWLIGPGDLCSRCAQRPRCPDQTRCLHLLAAGEKRKAGGAHDSSSVYNSQQRMPLGVGFAGRIATSGQVMVLKNFKDVRDEFVGVDLSRLGKIRHCAGAPISFRGEVLGVFVIFSHANITRDRSAWHKIFADHIGAAVVNARAFEEIQTLKTELEQQNALLKEEVIEARAFGDLVGQSAALRQVSSQIDLVAPTDASVLILGETGTGKELVAHEIHRRSKRQDKPFVRVNCASIPKDLYESEFFGHARGSFTGALKDRAGRFESAEGGTLFLDEIGEVPLELQSKLLRVLQEKSYERVGEDRTRHADVRIIAATNRDLKKEAAAGRFREDLYYRLNVFPIQVAPLRERREDIPLLAQHFIKFSMKEMGCAKPRLTRAGIIELQSYDWPGNIRELRNVIERAVILARGKALEFDLPSHQAPADVVSPKSRAEASADAGYLTEAEMLQLERGNLAKVLEKANWKIKGADGAAELLGIKPNTLLARIKKFGLRR*