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berkeley_reactor_200306_planktonic_scaffold_158606_154

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 201589..202506

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJS0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 305.0
  • Bit_score: 503
  • Evalue 8.20e-140
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF59946.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 305.0
  • Bit_score: 503
  • Evalue 1.20e-139
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 300.0
  • Bit_score: 182
  • Evalue 1.60e-43

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 918
ATGTTGAAGAAAACGACCACGCCCGAACGCAGCACGGCTGCCGCGTTTCCCCGGTATCTCACCGGCGAAGTGGTGGCGGATAGCGTGGCGCTTCAGTGGCCGGGGCTGTATGCCCGGCGCTGGCGGTTTCCGCGCGTCATGGATCGCTTTCTCGTGCCGGCCACCCCGGAGCCGCATATTTCCTGCACGCTGCAAGGAGTGGCCGAGTTTCGGGAACGCGAGGTGGGCGGCGCATGGATCGTGCGGAAAATTCGTGCGGGCGACCTGTTCGTCACGCGTTCGCGCACGCCTTGCGAAGTGGATTTCCAATCGCCGCGCGGTGAAGAACTCGAAACGCTTTCCCTCCACATCGCCGTCGAACCGTTCCTGGCCGTGCTCGGATCACGCTATCCCGGCAAAGCCGACCGGGTGGAGGTGGTGGATTATTTTGGGCGGGATGAAATCCTGTGGCCCATCTGCCTGACCTGCGCAGAGCTTCTGGCCGCATGTGTGCCGGGCAAGTCGCCCCGCGTCGCGGCGCTCACCCAACTCTTCGCCGCGCACCTCGTCGAGAAATACACGAGCCCGCCAACGCGGACACCCATCCATCGCAGCGGTCTGCCCATTCATCAACTCCGCAAGGTGCAGGATTACGTCGCCGCGCAACTGGCGGAAGAAATCTCCATCAAAGCGCTCGCGAAACTGGTGGAATTAAGCTCCTCGCATTTTGCCCATGTCTTCAAGGAGTCCACGGGCATGACGCCGTTGCAGTTCATAACCCGCCAGCGCATCACCCGCGCCCAACAGTTGATTCGCGAAACGTCGCGCAATCTCATCGAGGTCGGCCTGGAAGTGGGTTATACCAGTCCCAGCCATTTCGCCCAAGTCTTCCGTCGTGTGGTCGGTGTCACGCCAACCGAGTTTCGCAGCTCCCTTTGA
PROTEIN sequence
Length: 306
MLKKTTTPERSTAAAFPRYLTGEVVADSVALQWPGLYARRWRFPRVMDRFLVPATPEPHISCTLQGVAEFREREVGGAWIVRKIRAGDLFVTRSRTPCEVDFQSPRGEELETLSLHIAVEPFLAVLGSRYPGKADRVEVVDYFGRDEILWPICLTCAELLAACVPGKSPRVAALTQLFAAHLVEKYTSPPTRTPIHRSGLPIHQLRKVQDYVAAQLAEEISIKALAKLVELSSSHFAHVFKESTGMTPLQFITRQRITRAQQLIRETSRNLIEVGLEVGYTSPSHFAQVFRRVVGVTPTEFRSSL*