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berkeley_reactor_200306_planktonic_scaffold_158606_187

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(246256..246942)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000378E0E9 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 210.0
  • Bit_score: 232
  • Evalue 2.70e-58
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 210.0
  • Bit_score: 232
  • Evalue 7.50e-59
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADK80951.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 210.0
  • Bit_score: 232
  • Evalue 3.70e-58

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Taxonomy

Spirochaeta smaragdinae → Spirochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 687
ATGAGCCGTTTAAAACCGACCGCTGAAAAAAATGCCCGGCGCCAAATTTTTCTGGTGGATGACCATCCCATCACCCGCGAAGGTCTGGCGCGGCTGATCAATTGCGAGTCGGACATGGAAGTGTGCGGCCAGGCCGGCAACGCGAGCCGGGCCATTGCGGAAATCGCCGCGCTGAAACCGGATCTGGTCATCGTGGACGTCTCCCTGACCAGCGGCCCCAGCGGGCTGGAACTGATCAAGGATCTGCTGGTCCGGCATCCCCGGCTGCGCATGCTGGCGCTCTCCACCCATGATGAATCGTTGTATGCCGAACGCGCGCTGCGCGCCGGCGCCAAGGGTTACGTCATGAAACAGGAGCCAACCGAAAAAGTCATGACCGCCATCCGCCAGGTGCTGCATGGGCGCATTTACCTGAGTGAGGCGATGAACGAGCGTTTGCTTCGCAAAATGACCCAGCCCGGCCATCCGCCCGGCACTTCGGAAATCGAACGCTTGAGCGATCGCGAACTCGAGGTGTATCGGCTCATCGGCCAGGGCCGGAGCACGCGCCAGATCGCCCATGAACTTCACCTGAGCATCAGCACCATCGAAACGCATCGCACCCACATCAAGGACAAGCTGCATCTTTCCAGCGCGGCGGAACTGGTGCGCCGCGCGGTGGAATGGGTTCACAGCCAGGCGTCCTGA
PROTEIN sequence
Length: 229
MSRLKPTAEKNARRQIFLVDDHPITREGLARLINCESDMEVCGQAGNASRAIAEIAALKPDLVIVDVSLTSGPSGLELIKDLLVRHPRLRMLALSTHDESLYAERALRAGAKGYVMKQEPTEKVMTAIRQVLHGRIYLSEAMNERLLRKMTQPGHPPGTSEIERLSDRELEVYRLIGQGRSTRQIAHELHLSISTIETHRTHIKDKLHLSSAAELVRRAVEWVHSQAS*