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berkeley_reactor_200306_planktonic_scaffold_158606_188

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(246917..249007)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y6V9_THIV6 similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 524.0
  • Bit_score: 270
  • Evalue 2.70e-69
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 524.0
  • Bit_score: 270
  • Evalue 7.60e-70
Tax=RBG_16_Gamma2_64_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 516.0
  • Bit_score: 317
  • Evalue 3.50e-83

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Taxonomy

RBG_16_Gamma2_64_11_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2091
ATGACGTATTTGCGGCGCCAGCTGTTCGAGACACAGCGGATAAAAACGCCAGGGGTTCCCTTCGTCAAAAATCCACGCCCGGAAAAACCGGTCCGGGCCGATTCCAACCCGAAAAATCTCAGCCTCTCGGAAAGGCATTTCCGACTCCTGTTTAAAACCATGTTGCAAGGCGTGGTTTATCAGGACGCCGCCGGCCGGATCATCGCGATGAATCCCGCCGCCCGCCGTATTCTTGGCAAAACCGCCTCGGAGATCATGGGCAAAACGTCGGTGGAATTGGGGCGGCACACGTTGCGCGAGGACGGCACCCCGTTTCCGGGCACTGAGCATCCTTCGATGGTGGCGTTGCGAACGGGCCGGGAGGTGCGGGATGTGAGCATGGGCGTCTATAATCCGCGCGAGAAAGATTATCGCTGGATCAACATCAGCGCCGTGCCGTTGTTCCATGGGCGGTCGGCCCGGCCCTATCAGGTTTACACGATTTTCGATGACATCACCGAGCGAAGAAAAAACGACTTCGCCCTGAAGGTTGCCCAGCGGCTGGCCGGCGTGGGCAGTTGGGAGTGGGATATTCGCAGCGACCGGCACCATTGGTCGGAGGAAGTCTATCGAATTTACCGGCGAAATCCCGCCTTGCCGCCGGTGGTGTATCCGGAAGTGAAAAAATTCTTCACCGCGGAAAGCTGGAGCATCCTGTCCGCCGCCGTGGAAAAATGCCGGACCGGGGGAACGCCTTACCAATGCGATGCGGAAATGGCGCTGCCGGATGGCGGCCGGCATTGGATCACCGCGCGGGGCGAGGCGGTTCGGAACGCGGCCGGCGAGATTTTCAAGCTGCACGGCACGGTGCAGGACATCACCGCACGCAAACACACCGAAGCATTGGTCCAGCGCGCCAACCGCACCCTCCAAGCCATTCGCGCCTGCCATGAAGCCATGCTCCGCGCGAAAACCGAGCCGGAACTTTTGAACGAGATCTGCCGCGTCATTGTGCAGACCGCCGGCGAGCGGCTGGCCTGGGTCGGGTTTGCGGACAAGGGGGCGGGCAAACGCGTCAAACCGGTTGCCCGGGCGGGCTTCAGCCAGAACTACATTGACCGCGCCGGCATCACCTGGGCCGATTCGCTGCGGGGCCGGGGGCCGGTGGGCACCGCCATCCGCACGGGCCGGATCTGCCTGTGTCGCGACACCCTGACGGACCCCCATTTTGCGCCCTGGCGTGAATACGCGCGCAAGTGCGGCTACGGATCGGTTTTGGCGCTGCCGTTGATGCTGGACAAGGAATGTTTCGGAGCGCTATGCATTTACGCCCTCAAGCCGGACGCGTTCGACAGCAACGAACAGCAGTTGCTGGCGGATCTGGCCAACGACCTGTCGTTTGGCATCACCACGCTGCGGCTGCGCGCCGAACGCGAGCGGCTGGAGAATGAAGTGCTGCATTCCATCGAGCGCGAACAGGAGCGCATCGGCCGCGATTTGCACGACGGCCTCTGCCAAATGCTCGTCGGCGCCAAATTCCGCAGCGTTTACCTGGCCCGGCTGCTGAACGACAAAGTGCCGGCGGCGGCGCAGGAAGCCGGGTTACTTGAAGAAATCCTCAACCAGGCGACCGAGCAGGCCCGCGATCTGGCCCGGGGATTGAATCCGGTCAAAGCCACCGCGCATGGCCTGGAATCCGCGTTGCAACGGCTGGCGCAAAGTGTGAAGGCGCAGGCCGGCGACGGACCGCATTGCTTTTGTCATTTCCCGAAACGGATTCGCATCACCGACCACAAACTGGCCAATCATCTTTACCGGATCGCGCAGGAAGCCGTGCAAAACGCGGTGAAACATGCCGGAGCCCGGAATATTTCCATCACCTTGAGACGGGAAAACCGGCAGCTGCAATTGACCGTCAAGGACGACGGCAAAGGCCTGCCGGTGCGCCCGAAAAAAACCGGCATGGGCCTGGAAAACATGCGCACCCGCGCCGCGCTCGTCGGCGGTTTTTTGGAAATTCGCCGGCGCAAACAGGGCGGCACCGCCGTGTCCTGCCGCGTGACGCCCGCAGCCTCTGGAGGCAATTATGAGCCGTTTAAAACCGACCGCTGA
PROTEIN sequence
Length: 697
MTYLRRQLFETQRIKTPGVPFVKNPRPEKPVRADSNPKNLSLSERHFRLLFKTMLQGVVYQDAAGRIIAMNPAARRILGKTASEIMGKTSVELGRHTLREDGTPFPGTEHPSMVALRTGREVRDVSMGVYNPREKDYRWINISAVPLFHGRSARPYQVYTIFDDITERRKNDFALKVAQRLAGVGSWEWDIRSDRHHWSEEVYRIYRRNPALPPVVYPEVKKFFTAESWSILSAAVEKCRTGGTPYQCDAEMALPDGGRHWITARGEAVRNAAGEIFKLHGTVQDITARKHTEALVQRANRTLQAIRACHEAMLRAKTEPELLNEICRVIVQTAGERLAWVGFADKGAGKRVKPVARAGFSQNYIDRAGITWADSLRGRGPVGTAIRTGRICLCRDTLTDPHFAPWREYARKCGYGSVLALPLMLDKECFGALCIYALKPDAFDSNEQQLLADLANDLSFGITTLRLRAERERLENEVLHSIEREQERIGRDLHDGLCQMLVGAKFRSVYLARLLNDKVPAAAQEAGLLEEILNQATEQARDLARGLNPVKATAHGLESALQRLAQSVKAQAGDGPHCFCHFPKRIRITDHKLANHLYRIAQEAVQNAVKHAGARNISITLRRENRQLQLTVKDDGKGLPVRPKKTGMGLENMRTRAALVGGFLEIRRRKQGGTAVSCRVTPAASGGNYEPFKTDR*