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berkeley_reactor_200306_planktonic_scaffold_226867_71

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(100359..103370)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB09_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 1004.0
  • Bit_score: 668
  • Evalue 6.40e-189
Histidine kinase {ECO:0000313|EMBL:EEF63194.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 1004.0
  • Bit_score: 668
  • Evalue 8.90e-189
two component regulator, sensor protein similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 1009.0
  • Bit_score: 427
  • Evalue 5.40e-117

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3012
ATGATTCAGCGCCGTTTCCTGCTTTGCCTTCTCTGCCTGCTCGGGAACGTTGGCGCGGTCAGGGCGGAAACAACCAATGTTGATTCTGAATTCCTGGTTAAGAGCTGGCAAAACGAGGACGGCCTGCCTCAAAGCATCATCAATTCCATTGTGCAAACGCACGATGGCTACCTCTGGATCGGCACCTATGTGGGGTTGGTGCGTTTTGACGGGGAACGATTCGTCCAGTATTCGGCGCGCAATGTGCCGGACCTGGAAAATGACGAGATCATTTACCTTTATCAAGGCACCGGCAACACCCTGTGGATTTCGCTTCAAAGCGGGGGCCTGCTCGCCTGGCATGAGGGCAATGTTCGCGTGGTTCTGCCGGACAATTCAAAGCAACAACCGGTCATTCACATGGCCCAGCAAACGGATGGCACGTTATGGGTCGAAACCTCAGACGGCTCCCTGGGAATGGTGACAACCAATGGAGTCAGGTTTGTGCTTAACAGCGCGGATTCGCCAATCCGGGCGAATCGGGGGCTGGTCGTGGATGCCGCGAATCATTTGTGGGTGGGAACCGATCGGGGACTGAAATTGTGGCAGCAAGACCGGCTGGTTTCTCCCAAGTTGGACGCTCTGGACGGAAAACCGGTTGAAGACATGATTCCTTCCCGTGATGGAGCCGTATGGACGTATTACAACCGGCGCCTTTACAAAGTGCAGTTTGGAAAAACGCTCAAAGTCATCAAGGCGCCGGATCAACTGCAAGGCGTGGCGAGCATGTTGGAAACCTCCAGCGGCTGGCTTTGGCTCGGGGCGAATGAAGGCACATTATATTACCGTAAGCCCGATGCCACGGACTGGGAGGAAATTCCTCAGACCGGTTTCCGAGGCTTGAACCGAGTTTTGTATGAAGACCATGAAGGCAATGTCTGGCGGGGCGGTTTCGGCGGCGGATTGACCCGAATTCGGCCACACATTTTCACCCTGCACGAATTGCCCGGGAATTCCATCAACCGTTATGCCCGGGCGGTTTGCGCCGACCAACAAGGAAACGTGTGGGCCATTTTGGATGCGCAAGTTCTGTCGTGTATTCCCGCCGGATCACGGATGCCAGAAGCGCGGATCAACTCCGGCATTGCCAATGGGATCAAGGCTTTGTTCGTGGATCGCCAAGGGTCACTTTGGGCAGGCACCGACGGCGGACATCTTTACCGCCTGAAAGAGGACGCGCACGACAATCCGTTTGCCCTAAAAATCAACCTGGGCACCGGCATTGATTACATCAGCGCCATCTTTGAGGACGCCTCCAGCAATCTCTGGATCGGCTACACCGGCGGCGCGGGCGTGGCGATGTTGCCCCATGGCGACCCAGCACGGTGGCATCCCGTCGCAGGTTTGGCCTATCCGGATGTTCGCACCATCACGCAAGCGTCTGACGGCGCAATATGGTTTGGCACGCATTACGGCGGCGCCTTTCGCTGGCAACATGGACAATGGACGAGGTGGACGATCAAAGACGGCCTGCCTTCCAATTATGTCCGCTGCCTGCTGGCCGATCCGGACGGCACGATTTGGATTGGGACGATCCACGGGCTGTGCCGCTGGCGGGCCGGAAAGCTGGTGTCCATCACTTCCGAAGACGGTCTTTGGAACGACTCGATTTCCTATATCACCACGGATCAAGCCGGCAACTTCTGGATCAGTTCGTTCGGCGGCATCTTCCGCGTCAGCCGGAAAGACTTGAACCGTTTTGCCGACGGCGAAGCCCGGGACGTCAAGTGCGTGGGATACGACCGAAATGATGGCCTGCCCAGCGTGGAATGCCCCGGCGGGGTGCAATCTGCCGGCGCCAAAACACCTGACGGACGGCTCTGGTTTCCCACCGTCGTCGGACTCGTCAGCGTTGATCCAAAACACATGCCGCACAACCAGGTGCCGCCTCCGGTCTGGATCGAAAACCTGACGGTGGATGGCAAATCCATTCCGATCCAGCATGCCACAAAACGAATCCGGATCGGACCGGGCAAACGCCGCTTCGATTTTCGCTTTACCGCCCTCAGTTTCACTTCGCCGGAAAAAGTTCGTTTTGAGCACAAGCTCGCCGGATTGGACGCCGACTGGTCACCCGCGGACCATCATCGTTCGGTGATTTACAACTATATTCCGCCCGGCCATTACACCTTTCAGGTCGCTGCCGGCAACAACGATGGCGTCTGGAACTGGCAGGGCCAGAAACTGGCCATTATTGTCCAGCCTTTCATTTGGCAAACCTGGTGGTTCAAGGTGCTGGCTGGCTTGGGACTGGCCGCCGCACTGGCCTGGGGCGTCCGGCGCCGCGAACGCTGGAAGGCCCGGTTGCGGGTTGAGCGATTGGAACGCGAACATGCGGTCGAGCATGAGCGCAGCCGGATTGCCAAGGACATCCACGACGATCTCGGGGCCAACCTCACCCAGATTGTTTTCCTGAGCCAGCGCGTCGAAGGGGTCCGCCACCAACCTTCTGAAGTCGAACGTTGGATTCGGAAAATCCCCGCTGCGGCCAGCCGCACCATTCAGTCATTGGACGAAATCGTCTGGGCCATTAATCCAAAACATGATTCGCTGGAAAGTCTGGCCAATTATCTCAGCCGGTTTGCACATGATTTTCTCACCCTGGCGGGAGTTCGCTGCCTGTTGGAGGTGCCGACCGTGCTGCCACAGATTCCGTTGAGCGCCGAAGGGCGTCACAACCTCATCCTGACCGCCCGTGAAGCGTTGCAAAACGCCGTGACCCACGCCATCGCCAAGGAAGTGAAGGTTTCGTTGCAATTAAATGAAGCCGGGTTGAAAATTGCCGTTACTGACAATGGCTGCGGCTTTGATCCTGGCCGCGTGGCAAAACCCGGCAACGGCTTGGCCAACATGCGCAAACGCATGGAAGACATTGGCGGCACCCTGGAAATCATCAGCGAGCCCGGGAAAGGAACCAGGGTGCAATTGAAATTGCCGGCGCATCGTTTAACCCAACCTGGGATTGGCAAATGA
PROTEIN sequence
Length: 1004
MIQRRFLLCLLCLLGNVGAVRAETTNVDSEFLVKSWQNEDGLPQSIINSIVQTHDGYLWIGTYVGLVRFDGERFVQYSARNVPDLENDEIIYLYQGTGNTLWISLQSGGLLAWHEGNVRVVLPDNSKQQPVIHMAQQTDGTLWVETSDGSLGMVTTNGVRFVLNSADSPIRANRGLVVDAANHLWVGTDRGLKLWQQDRLVSPKLDALDGKPVEDMIPSRDGAVWTYYNRRLYKVQFGKTLKVIKAPDQLQGVASMLETSSGWLWLGANEGTLYYRKPDATDWEEIPQTGFRGLNRVLYEDHEGNVWRGGFGGGLTRIRPHIFTLHELPGNSINRYARAVCADQQGNVWAILDAQVLSCIPAGSRMPEARINSGIANGIKALFVDRQGSLWAGTDGGHLYRLKEDAHDNPFALKINLGTGIDYISAIFEDASSNLWIGYTGGAGVAMLPHGDPARWHPVAGLAYPDVRTITQASDGAIWFGTHYGGAFRWQHGQWTRWTIKDGLPSNYVRCLLADPDGTIWIGTIHGLCRWRAGKLVSITSEDGLWNDSISYITTDQAGNFWISSFGGIFRVSRKDLNRFADGEARDVKCVGYDRNDGLPSVECPGGVQSAGAKTPDGRLWFPTVVGLVSVDPKHMPHNQVPPPVWIENLTVDGKSIPIQHATKRIRIGPGKRRFDFRFTALSFTSPEKVRFEHKLAGLDADWSPADHHRSVIYNYIPPGHYTFQVAAGNNDGVWNWQGQKLAIIVQPFIWQTWWFKVLAGLGLAAALAWGVRRRERWKARLRVERLEREHAVEHERSRIAKDIHDDLGANLTQIVFLSQRVEGVRHQPSEVERWIRKIPAAASRTIQSLDEIVWAINPKHDSLESLANYLSRFAHDFLTLAGVRCLLEVPTVLPQIPLSAEGRHNLILTAREALQNAVTHAIAKEVKVSLQLNEAGLKIAVTDNGCGFDPGRVAKPGNGLANMRKRMEDIGGTLEIISEPGKGTRVQLKLPAHRLTQPGIGK*