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berkeley_reactor_200306_planktonic_scaffold_226867_72

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(103442..106156)

Top 3 Functional Annotations

Value Algorithm Source
Putative secreted xanthan lyase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KVU9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 658.0
  • Bit_score: 597
  • Evalue 2.10e-167
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66820.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 658.0
  • Bit_score: 600
  • Evalue 3.50e-168
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 694.0
  • Bit_score: 549
  • Evalue 1.40e-153

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2715
ATGGCGATGGGGTTGCTGTTTTTGCTCGCCATTGCCCTGCCGGCAAACGCGGTTCAAGAAATTGACGCCGATGTCTGCGTTTATGCCGGCACTTCGGGCGGAGTCATTGCCGCCGTCCAGGCGGCGCGTATGGGAAAGAAAGTGGCGCTGGTGGCCATTAACAAGCATCTGGGCGGCATGACCAGCTCCGGTTTGGGGTGGACGGACATTGGCCATGTGGACAACGATTCCGGCGATTACATTCAAGGGGTTGCCCGTGAATTCTATAATCGAATCGCGCAAAAATATGGCTTGTCGGGCACCAAATGGCATTTCGAACCGCACGTGGCCGAAGCCGTCTTCGATGACATGGTGCGGGAAGCCGGGGTGATGGTTTATACGAACGAACTGTTGGCATCCGTCGTCAAGCAAGGCTCGCAAATCATCGCGGCCAGGATGAGCAACGGGGACATTTTTCGCGCCAAGGAATTTATTGATGCCAGTTACACCGGCGATTTGATGGCCATGGCGGGTGTCAGTTACACCGTCGGGCGCGAGTCCACGAATCAATACGGGGAAAGCCTCAATGGTATCCGCCCGCCCAACAGCGATTTTACCAGTTACAACATCAATCCCTACGTGGTGCCCGGGAACATGGCCAGCGGGTTGATTCCGCTGCTGCAAACCAACTCGCCGGGGATTCCCGGGAATGCGGATCAAAAAGTTCAGGCTTACAATTTCCGTCTGTGCCTGACGACGGTTTCGTCCAACAAGATCGCCATTACCGCTCCGCCGGGCTACAACCCCAACGAATACGAACTGCTGGCGCGTTACATTCAGGGCATGGAAGCCGCCAACGTCACGCCTTCGCTGAAGATGTTCATGACCATCAGTTCCATACCGAATGGAAAGACCGATATTAACAACAACGGCGCGTTATCCACGGATTATGTCGGTGAAAGCGCCGCCTACGTGGAAGCAGATGCGGCAACGCGGGAACAAATCTGGCAGGCGCACCGGGATTATGAACAGGGGTTTTTATATTTCCTGGCTACGGACCCGCGCGTGCCGTCCAACATTCGCACCGCCATGCAATCCTACGGCTTCGCCAAGGATGAGTTTACCGACAGCGGCGGCTGGCCGTTCCAACTTTATATTCGCGAAGCGCGGCGCATGGTTTCGGATTACGTGATAACGCAATCCAATGTGTTCAACCAATTGCAAGTTCCTGATTCCATCGGGCTGGCCGGGTATTTTACGGATTCCCATTATTTGCAACGCATCGTGGTCAATGGCCAGCCGCGCAACGAAGGCGATGCCCGTGGCGACATCACCGTGCCCTACCCGATTGCGTATCGCGCGCTGGTGCCCAAGACCAATGAGTGTTCCAATCTGCTGGTGCCGTGGTGCCTGTCGGCTTCGCACACGGCCTTTTGTTCGATCCGCATGGAACCGGTCTTCATGATTCTGGGCCAGGCGGCCGGCACGGCGGCGTGCTTCGCGATGGATGAGCAAACCAATGTTCAAAGCGTCAATATTCAGAAATTGCAGGCGCAATTGGTGGCGGACCAGCAGGCGATTGGATCGGTGGAGGACTCGGGAATTATCGTGGACGATGCGGATAGCAGCGGCGTGACCCTGGTCGGCTCCTGGACCAGCAGCTCGGCCACGACGGGTTACTGCGGCAGCGATTACCTGCATGATGGCAATGCAAACAAAGGTTCCAGCAGCGTCACCTTTACGCCCGTGTTGCCGAGCAGCGGGGTGTATCAGGTTTATGCCCGCTGGACCGCCAATGCGAACCGGGCGGATAATGTTCCGTTTGACATTGTTTCCCCTTCCGGAACCACCACCGTCACCGTGGACCAGACGCAACAAGGCGGGCAGTGGGTCCTGTTGCAAACCACCAATTTCAATGCCGGCACCGCCGGCAAGGTGCGCATTCGCAACGACGGAACCACCGGTTACGTCATCGCCGATGCTGTTAAATTTATTGAAGGGGAAAACCTGCCCGACATCAGCATCTGGCCCACGGATGCGGCGGCCTCCCGGCTCGGGCCGGTGGCGGGCAAAGTGACGGTTTCCCGCTCGGGAAACATCAATGTGCCCGTGACCGTTGACTTCAACATCGGCGGTTCTGCGGTCAACGGCGACGACTATCATGCCATTGGCGGCGTCATGTTGTTGCCGGCCGGGGTCACCACCAGCACGATCACCGTCCTGCCCTATACCAATGCAGAGCCGGTGGGGAACAAAACCGTGATCATCACGCTGGTCACCAATGCCGCCTACCGGGTCGGCGGTCTGAACTCGGCCAGAGTAACCATTGCTGACACGCCGATTAACGAATGGAAATTCAATTACTTTGGTCCCGATGCAACCAACGAAACCATTGCCGGAGACAAGGCTGATCCTGCCGGCGACGGGATTCCGAATCTTTTGAAATACGCCCTGGGGTTGCCTCCGACTCAAGTCGTTACGCAGCCCCTGATCACTCCGCTTCTGAACCCCAATGGTTGTTTCCAGGTGTGGTATGCGCGGCCGGATCCGCCGCCGCTGGATGTTTCCTACCGGCTGGAAAGTTCGAACAACCTTTCCACCTGGTGCACCAATGGCTGCATCATCACCCGGCAAATTTTCCTCAACCCCAATACCGCGACCGTGGTTTCGGAAGATCCCATGCCCGTGGCCGGTCAAACGGGCAAATTCGTGCGGCTGCGGATTTCCAGGCAGTGA
PROTEIN sequence
Length: 905
MAMGLLFLLAIALPANAVQEIDADVCVYAGTSGGVIAAVQAARMGKKVALVAINKHLGGMTSSGLGWTDIGHVDNDSGDYIQGVAREFYNRIAQKYGLSGTKWHFEPHVAEAVFDDMVREAGVMVYTNELLASVVKQGSQIIAARMSNGDIFRAKEFIDASYTGDLMAMAGVSYTVGRESTNQYGESLNGIRPPNSDFTSYNINPYVVPGNMASGLIPLLQTNSPGIPGNADQKVQAYNFRLCLTTVSSNKIAITAPPGYNPNEYELLARYIQGMEAANVTPSLKMFMTISSIPNGKTDINNNGALSTDYVGESAAYVEADAATREQIWQAHRDYEQGFLYFLATDPRVPSNIRTAMQSYGFAKDEFTDSGGWPFQLYIREARRMVSDYVITQSNVFNQLQVPDSIGLAGYFTDSHYLQRIVVNGQPRNEGDARGDITVPYPIAYRALVPKTNECSNLLVPWCLSASHTAFCSIRMEPVFMILGQAAGTAACFAMDEQTNVQSVNIQKLQAQLVADQQAIGSVEDSGIIVDDADSSGVTLVGSWTSSSATTGYCGSDYLHDGNANKGSSSVTFTPVLPSSGVYQVYARWTANANRADNVPFDIVSPSGTTTVTVDQTQQGGQWVLLQTTNFNAGTAGKVRIRNDGTTGYVIADAVKFIEGENLPDISIWPTDAAASRLGPVAGKVTVSRSGNINVPVTVDFNIGGSAVNGDDYHAIGGVMLLPAGVTTSTITVLPYTNAEPVGNKTVIITLVTNAAYRVGGLNSARVTIADTPINEWKFNYFGPDATNETIAGDKADPAGDGIPNLLKYALGLPPTQVVTQPLITPLLNPNGCFQVWYARPDPPPLDVSYRLESSNNLSTWCTNGCIITRQIFLNPNTATVVSEDPMPVAGQTGKFVRLRISRQ*