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berkeley_reactor_200306_planktonic_scaffold_228973_83

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(91876..92568)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFD6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 238.0
  • Bit_score: 295
  • Evalue 4.40e-77
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 238.0
  • Bit_score: 295
  • Evalue 6.20e-77
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 224.0
  • Bit_score: 157
  • Evalue 3.10e-36

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 693
ATGAAATCAGTCTCGTTGAAAGCTTATCCGCGTTCGCAAGTGCAGCGCTCCGAAGTCAAAAAACTGCGCGCCTCCGGCCGTGTGCCCGCGACGATTTACGGCCGCCAGACCCAGCCGCAAAACTTAGAAGTCATTTACGACGAAATTTCCAACCTGCTCAAACATTCCGTTTCGGAAAACTTGCTGGTGGATTTGTCCGTGGAAAACGACGCCCGCGCCAAACGCCTGGCCATGTTGCAGGAAATCCAGCACCATCCCCTCGACGGCAAGGTGCTGCATGTGGATTTTCATGAAATCGCCGAGGACGAAAAAGTGACGATTTCGGTTCCACTGGAAACGTCCGGCGAGCCGGTCGGGGTGAAGGTGGACAAAGGCACGCTGGAACACGTTCTGTTCAAACTCAAGGTGCGCGCGTTGCCGAAGGATTTGCCGGAGTTGATCGTGGTGGATGTGAGCAACCTGGGCGTGGGGCAGACGATTCACCTGGGCGATGTGGTTCCGCCGGGGGGCGTCGAAATTTTGGGCGACAAACACATCTCCGTGGTGTCCGTGGCTGCGCCGCGCGCCGAGGAGGAAGTTGCTGCGACGGCCGAGGGAGCCGCCCCGGCCGCCGCCGAGGTCGTCATGACCAAGGAGAAGAAAGAAGAGCCCGCCGCGGCGGCGCCGGCAAAGGCCGACGCCAAGAAGAAGTAA
PROTEIN sequence
Length: 231
MKSVSLKAYPRSQVQRSEVKKLRASGRVPATIYGRQTQPQNLEVIYDEISNLLKHSVSENLLVDLSVENDARAKRLAMLQEIQHHPLDGKVLHVDFHEIAEDEKVTISVPLETSGEPVGVKVDKGTLEHVLFKLKVRALPKDLPELIVVDVSNLGVGQTIHLGDVVPPGGVEILGDKHISVVSVAAPRAEEEVAATAEGAAPAAAEVVMTKEKKEEPAAAAPAKADAKKK*