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berkeley_reactor_200306_planktonic_scaffold_228973_84

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(92602..93675)

Top 3 Functional Annotations

Value Algorithm Source
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 314.0
  • Bit_score: 517
  • Evalue 9.10e-144
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 312.0
  • Bit_score: 407
  • Evalue 2.70e-111
Ribose-phosphate pyrophosphokinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFD7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 314.0
  • Bit_score: 517
  • Evalue 6.50e-144

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1074
ATGCGCCCTCGTTCCCGACCGGCCAGAAATTCGGCTTGCGAAGGGCAGGGCGGGTGTTACGATTTTGCGACGATTCATCCGCCCATTTCGGCGGGTTTTCTTTTTTTAACCGGCAGCAACCATTTTATTGTGAAAATCTTCAGCGGCACCGCCAATGAGCCACTGGCTCGCGCCATCTGCAAATCCGTCGGCTGCGAGTTGGGCAAGTGCAACATCACGCCGTTTCCGGACGGTGAAACCTTCGTGAAAATCGAGGAAAACGTGCGGGGCGAAGATATTTTCATCATTCAGCCGACCTCGCCGCCGACGAATCACAATCTGATGGAATTGTTCATCATGATTGACGCCTTGCGCCGGGCCAGCGCCAAGCGGATCACGGCCGTCATGCCGTTTTACGGCTACGCCCGCCAGGATCGCAAGGATCAGCCGCGCGTGCCGATCACGGCCAAGCTCGTGGCCAACCTGCTCGTCGCCGCCGGTGCCAGCCGGGTGTTGACGATGGACTTGCACGCCCAGCAGATTCAGGGGTTTTTCGATATTCCGGTGGATCACCTTTACGCCGCGCCGGTGATGTATGAATACTTGAAAAAGAAGAACTTGACCAACCTGGTGGTGGTGAGCCCCGATGCCGGCGGCATCAAAATGGCGCACGCTTATTCGCAGACGCTGGAGACCGAGCTGGCCATCGTGGCGAAACGTCGCAAAAGCGCCACCGAAGTCGAAAGCATGGCGGTGATTGGCGATATTGAGGGCAAAAACGTGCTGTTGGTGGACGATTTGACGGAAACGGCGGGCACTTTGACCAGCGCTGCGGCGGTGTTGAAGACGAAGGGCGCCAAAAATGTGCTGGCCTGCGTCTCCCACGCGCTGCTGAATGACACGGGCATCGAAAGATTGCGTAATTCTGCTATTGACGAGTTGATAACAACTGATACAGTCCAACGCCCTGCGATTGACGGCGTGAAAATCACCACGCTGTCCGTTGCGGGGCTTTTGGGCGAAGCCATCAAGCGGATTCATAGTAATTCGTCGGTGAACTCCCTGTTTGAATTCAAAGGCGGACGCACCAGTTGA
PROTEIN sequence
Length: 358
MRPRSRPARNSACEGQGGCYDFATIHPPISAGFLFLTGSNHFIVKIFSGTANEPLARAICKSVGCELGKCNITPFPDGETFVKIEENVRGEDIFIIQPTSPPTNHNLMELFIMIDALRRASAKRITAVMPFYGYARQDRKDQPRVPITAKLVANLLVAAGASRVLTMDLHAQQIQGFFDIPVDHLYAAPVMYEYLKKKNLTNLVVVSPDAGGIKMAHAYSQTLETELAIVAKRRKSATEVESMAVIGDIEGKNVLLVDDLTETAGTLTSAAAVLKTKGAKNVLACVSHALLNDTGIERLRNSAIDELITTDTVQRPAIDGVKITTLSVAGLLGEAIKRIHSNSSVNSLFEFKGGRTS*