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berkeley_reactor_200306_planktonic_scaffold_176984_276

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 298720..299817

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NMY4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 361.0
  • Bit_score: 359
  • Evalue 2.30e-96
secretion protein HylD similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 361.0
  • Bit_score: 359
  • Evalue 6.50e-97
Secretion protein HylD {ECO:0000313|EMBL:AHF15421.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 361.0
  • Bit_score: 359
  • Evalue 3.20e-96

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1098
ATGAACAAGAACTATTTCATTGCCGTTCCGGCACTGATCCTGATCAGCGCATGCACCGACCTTAATGCATCGCGCGATAAGCAGGACACTCCTAAAGCCTATCCTGTTATTTCCGTAATAGAAAAAGATACTGCGCTGCATGCCCAATATGTAACGGATATACAAGCCAGGAAGAACGTAGAGATCTATGCCCGTGTACCGGGTATCCTGGAACATATCCACGTCGACGAAGGCGAGACCGTACGTAAAGGCCAGTTGCTTTTTACGATCAACGACGATGAACTGCAGATCGCGTTATCCAAAGCCAATGCCACCTGGAACAATGCAAAAGCCGATGCCCGTGTGGCCGAGGTAGAGCTCCAGCGTGTGGAGACCCTGGTACACAAAAAGATTATTGCGCATACCGAACTCGAACTGGCCGAAGCGAAGCTCAACGCCCTTAAAGCAAAAATCGAAGCAGCAGCCTCTGAGAAACAAACCGTGCTGAAGCAGCTCTCCTATACCCGTATTCATTCTCCCTTTGATGGTGTGATCGATAGATTACCGTTGAAGGAAGGCAGCTTCCTGCCCGAAAACACGCAGCTGACCACGATTTCAGATATCCAGTCTATGCTGGCCTATTTTAAAGTTTCGGAAAGCGAATACCTGAAACTGATGCACGAAGGCCGCGACAGCGCCATGGCGGCGACCGTGAGCCTGGTACTGGCCGATGGTTCCCTGTATCCCTTTGCCGGTAAGATAGAAACCTATGGCAGCGAGATCGACGACAATACCGGTTCCGTGACCTTCAGGGCCGATTTTCCTAATCCACGGAAAGTATTGAAACACGGGGCTTCCGGCACATTGATCATTGGCCGACCCAATGCCCGGGTGCTGATGGTACCGCAGAAATCGGTACTGGAAATACAGGACAAGAACTATGTGTATGTGCTGGGCGCCGACAATACCGTTCAGATGAAAAACTTTGAGCCGGCCAGCCGCATCAATGGTTATTATATCGTAGAAAGTGGTCTTACGGCAAAAGATAAGATCCTTTACGAAGGCGTGCAATCCATCAGGAGCGGGCAGAAGATAAGCCCTGTAGCGCCCCGCCTGTAA
PROTEIN sequence
Length: 366
MNKNYFIAVPALILISACTDLNASRDKQDTPKAYPVISVIEKDTALHAQYVTDIQARKNVEIYARVPGILEHIHVDEGETVRKGQLLFTINDDELQIALSKANATWNNAKADARVAEVELQRVETLVHKKIIAHTELELAEAKLNALKAKIEAAASEKQTVLKQLSYTRIHSPFDGVIDRLPLKEGSFLPENTQLTTISDIQSMLAYFKVSESEYLKLMHEGRDSAMAATVSLVLADGSLYPFAGKIETYGSEIDDNTGSVTFRADFPNPRKVLKHGASGTLIIGRPNARVLMVPQKSVLEIQDKNYVYVLGADNTVQMKNFEPASRINGYYIVESGLTAKDKILYEGVQSIRSGQKISPVAPRL*