ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_176984_277

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 299884..303018

Top 3 Functional Annotations

Value Algorithm Source
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Niabella soli DSM 19437 RepID=H1NMY3_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 1038.0
  • Bit_score: 1587
  • Evalue 0.0
multidrug transporter AcrB similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 1038.0
  • Bit_score: 1587
  • Evalue 0.0
Multidrug transporter AcrB {ECO:0000313|EMBL:AHF15422.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 1038.0
  • Bit_score: 1587
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3135
ATGATCGAAACATTTATCCGGCGACCGGTGCTGTCGCTTGTGATCTCGCTTATCATTACCCTGGTCGGCGCCATGGCCCTGTTCCAGTTACCGGTAACGCAGTTCCCCGATATCGTACCACCTTCTGTTATGGTAACGGCGCGCTATACCGGGGCCAATGCCGATGTATCGGCCAAGGCGGTTGCCATGCCTATCGAAAGGGCCATCAACGGTGTGCCGGGTATGACTTATATGTCGACCGTTACCGGCAACGACGGGATCACCATGATCCAGGTATTTTTCCAGGTGGGTACCGACCCCGACCAGGCCGCAGTGAATGTACAGAACCGCGTAACGACCGTGCTGGACGAACTGCCGGAAGAGGTAATCAAAGCAGGCGTAACGACCGAGAAGGAAGTGAATAGCATGCTGATGTACCTCAATATTACCAGCGCCGATGATGCCGCGGACGAACAGTTTATCTTCAATTTTACCGATATCAATATTCTCCAGGAACTGAAACGGATCGATGGTGTAGGGCGTGCGGAGATTATGGGACAACAGGAATATGCGATGCGGGTATGGCTGAAACCCGAACGCATGCTGGCGTACAACATCTCGGCCGATGATATCGTAACGGCATTAAGGGCCCAGAACGTGGAAGCCGCACCGGGTAAGACCGGCGAGAGTTCGGGTAAGAACCCGCAATCGGTGCAGTATGTACTGCGTTATACCGGTAAGTTATACGAGCCGCAACAGTATGAAAACGTCGTGTTGCGGGCCGATAACGATGGGGCCATACTCCGGCTTAAAGATGTGGCCGATGTGGAGTTTGGTTCGATGAGTTATGGTATGGTTTCCAAAACGGATGGCCGGCCTTCGGCTTCGATCATGATCAAACAGAGGCCAGGCTCCAATGCCCGCGATGTAATCCGGAACATCAAAGACCGTATGGAGGAGCTGGAACAAACCGCTTTCCCGCCGAAGATGACCTATAACATGGCCTATGATGTTTCACGGTTTCTCGACGCCTCCATCAGCGAGGTGATCCGTACCCTGATCGAAGCCTTCCTGCTCGTGGCTTTGGTGGTCTTTATCTTCCTGCAGGACTTCCGGTCTACGCTGATACCCGCACTGGCTGTACCGGTGGCCCTGGTGGGTACCCTGGCTTTTATGATGTTGATGGGTTTTTCGATCAACCTGCTCACGCTCTTCGCCCTCGTACTCGCTATCGGTATCGTGGTGGATAATGCGATCGTAGTTGTGGAAGCCGTACACATCAAGATGACGGAACAACACCTGCCGCCACTCGAGGCTACGATAGCGGCGATGAAAGAGATCAGCGGCGCCATCGTGGCGATCACCCTGGTTATGTCGGCGGTATTTATTCCCGTGGCTTTCCTCAGCGGCCCGGTGGGCGTGTTTTACCGCCAGTTTTCGCTTACGCTGGCCATCTCTATTTTTATATCGGGTATCAATGCCCTTACGCTTACACCGGCCTTATGCGCTCTTATCCTGAAGCACAATACACAGGTGCTAAAGAAAGGGCTGCTGAACCGCTTCTTTAATGGTTTTAATAAACGCTTTGACGCTACGAATAACAAATACCGTTCGCTGCTGGCGAAGATAGCCTGTCGCCGCGGGCTTACGCTTGTATTACTGGCGCTCTTCTTTGCCGCGACCTGGGGCGCGGGAGCGATATTGCCGGGTGGTTTTATCCCTACCGAAGACCAGGGCATGATCTATGTGAATGTGACCACCCCGCCAGGCGCTACGATGGAACGTACGGATAAGGTACTGGATGCCGTAACGGCTGCCGCGCGCAAGACGGAAGGTGTGGAGAATGTAACCACACTGGCGGGCTACAGCCTTGTAAACGAGATTGCGGGCGCATCGTATGGTATGGCCATGATCAATCTTAAACCCTGGCATGAAAGAAACCAGGATGTAAATGCGGTGATCGCGGCGATCGAACAAAAGGTAAAGTCGATCAACGATGCCAAGATCGAAGTGTTTGCCCCGCCTACGGTGCCTGGGTTTGGTAATACCGGCGGATTTGAGTTGCGCCTGCTCGATAAGACCGGCAAAGGTGATGTCCAGCAGACCGCAACGATAACACAACAGCTTGTGGATGCCTTGAATAAGACGCCGGAGATCAGCGGATCGTTTACCAGTTTCGATGCTTCGTTTCCGCAGTATATGATCCATATCGACCCGGATCTGGCGGCGAAGAAAGGCGTAACGGCCGACAATGCGATGAGCACGCTGCAAACCTTACTGGGCAGCTATTACGCGACCAATTTTATCCGCTTCAACCAGATGTATAAGGTAATGGTACAGGCCGGACCGCAGTACCGCACCGCACCCGAAGATATCCTGAAACTCTATGTCAAAAACAACCTTGGAGAGATGGTGCCCTTCTCCGCCTTTGTGAAGATTGAAAGGGTGTACGGCTCCGAACAGCTTACCCGCTATAACATGTACCTGTCGGCGATGATCAATGGTAATGCAGCAGCAGGCTATAGTAGCGGCGATGCGATTGCAGCCGTGGAAAAGGTAGCGGCTAAGGTATTGCCGAGAGGCTATAGTTACGAGTGGAGTGGTATGACCCGTGAAGAGATCCTGTCGGGCAACCAGACGAGTGTGATCTTCCTGGTCTGCCTGGTGTTTGTATACCTGCTGCTGGCCGCGCAATATGAAAGCTTCCTGTTGCCTTTACCGGTTATCCTGAGTTTGCCTTCCGGCATTTTCGGCGCATTCCTGTCGCTGAAGCTGGCCGGGCTCGAAAACAATATCTATGCACAGGTGGCGCTGGTTATGCTGATCGGTTTGCTGGGTAAGAATGCCATCCTGATTGTAGAGTTTGCGATCAAGAGCCGCAAAGAGGGCGCAAGTATTCTGCAGGCCGGCATCGACGGCGCCACGCAACGGTTACGGCCTATTCTTATGACATCCTTCGCCTTTGTGGCCGGACTTATCCCTTTGTGTATCGCTTCGGGTGCGGGCGCTATGGGCAACCGTTCTATCGGTACGGCGGCAGCCGGTGGTATGCTGATCGGTACGGTATTCGGGGTATTGGTGATCCCGGGCCTGTATGTATTGTTCGCCACTTTATCTGAACGTAAGAAAAAAAATAAAAACCATCCGGAAGGATAA
PROTEIN sequence
Length: 1045
MIETFIRRPVLSLVISLIITLVGAMALFQLPVTQFPDIVPPSVMVTARYTGANADVSAKAVAMPIERAINGVPGMTYMSTVTGNDGITMIQVFFQVGTDPDQAAVNVQNRVTTVLDELPEEVIKAGVTTEKEVNSMLMYLNITSADDAADEQFIFNFTDINILQELKRIDGVGRAEIMGQQEYAMRVWLKPERMLAYNISADDIVTALRAQNVEAAPGKTGESSGKNPQSVQYVLRYTGKLYEPQQYENVVLRADNDGAILRLKDVADVEFGSMSYGMVSKTDGRPSASIMIKQRPGSNARDVIRNIKDRMEELEQTAFPPKMTYNMAYDVSRFLDASISEVIRTLIEAFLLVALVVFIFLQDFRSTLIPALAVPVALVGTLAFMMLMGFSINLLTLFALVLAIGIVVDNAIVVVEAVHIKMTEQHLPPLEATIAAMKEISGAIVAITLVMSAVFIPVAFLSGPVGVFYRQFSLTLAISIFISGINALTLTPALCALILKHNTQVLKKGLLNRFFNGFNKRFDATNNKYRSLLAKIACRRGLTLVLLALFFAATWGAGAILPGGFIPTEDQGMIYVNVTTPPGATMERTDKVLDAVTAAARKTEGVENVTTLAGYSLVNEIAGASYGMAMINLKPWHERNQDVNAVIAAIEQKVKSINDAKIEVFAPPTVPGFGNTGGFELRLLDKTGKGDVQQTATITQQLVDALNKTPEISGSFTSFDASFPQYMIHIDPDLAAKKGVTADNAMSTLQTLLGSYYATNFIRFNQMYKVMVQAGPQYRTAPEDILKLYVKNNLGEMVPFSAFVKIERVYGSEQLTRYNMYLSAMINGNAAAGYSSGDAIAAVEKVAAKVLPRGYSYEWSGMTREEILSGNQTSVIFLVCLVFVYLLLAAQYESFLLPLPVILSLPSGIFGAFLSLKLAGLENNIYAQVALVMLIGLLGKNAILIVEFAIKSRKEGASILQAGIDGATQRLRPILMTSFAFVAGLIPLCIASGAGAMGNRSIGTAAAGGMLIGTVFGVLVIPGLYVLFATLSERKKKNKNHPEG*