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berkeley_reactor_200306_planktonic_scaffold_4894_39

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 35116..35805

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMA9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 228.0
  • Bit_score: 298
  • Evalue 3.00e-78
Integral membrane protein {ECO:0000313|EMBL:EDY82520.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 228.0
  • Bit_score: 298
  • Evalue 4.20e-78
nodulin-related integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 225.0
  • Bit_score: 280
  • Evalue 3.20e-73

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Taxonomy

Verrucomicrobiae bacterium DG1235 → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 690
ATGGCGCATGTGGAACATCATCGCATCAATCGCTCAGGGTGGTTGCGGGCTGCCGTCCTTGGCGCAAACGACGGCATTCTTTCCACCGCCAGCCTGATCGTGGGCGTGGCGGCGGCGAACTCCACGAAATCCAGCATCCTCCTCGCCGGCGTGGCCGGGTTGGTCGCCGGGGCCATGTCCATGGCCGCCGGAGAATACGTCTCCGTGAAGTCCCAGGAGGACACCGAGAAGGCCGACCTGAAGATGGAGGCCGAAGCCCTCGCCAATGACCCGGAGGAGGAGGAAGCCGAGCTCGCCGCCATCTACCGGGAGCGCGGGCTGGATGAAAATCTTGCCCTGGAGGTCGCCCGTCAGCTCATGAAAAAGGACGCCCTCGGCGCGCATGCCCGCGATGAAATCGGCATCACCGAGGAGCTGAGCGCCCGTCCGATCCAGGCCGCCATGTGGTCGGCCACCGCCTTTGCCTCCGGAGCCGTCGTCCCGGTCGTCACCGCCATTCTCGCGCCTGCCGGGATCGTCGTGTGGCTGGTTCCCGCGACCGCCATCACGCTGCTGTGCGCCCTCGGGGCTGTCGCCGCCGCGGCGGGCGGGGCGTCGATGTGGCGCGGGGCGCTGCGCGTTTGCTTCTGGGGCAGCTTTGCCATGGGCCTGACGGCTCTAATCGGCAGACTGTTCGGCATCTCGGCCTAA
PROTEIN sequence
Length: 230
MAHVEHHRINRSGWLRAAVLGANDGILSTASLIVGVAAANSTKSSILLAGVAGLVAGAMSMAAGEYVSVKSQEDTEKADLKMEAEALANDPEEEEAELAAIYRERGLDENLALEVARQLMKKDALGAHARDEIGITEELSARPIQAAMWSATAFASGAVVPVVTAILAPAGIVVWLVPATAITLLCALGAVAAAAGGASMWRGALRVCFWGSFAMGLTALIGRLFGISA*