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berkeley_reactor_200306_planktonic_scaffold_4894_40

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 35906..37291

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036CE5B7 similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 454.0
  • Bit_score: 677
  • Evalue 8.20e-192
C4-dicarboxylate transporter DctA similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 454.0
  • Bit_score: 676
  • Evalue 3.00e-192
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 454.0
  • Bit_score: 676
  • Evalue 1.50e-191

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGAATACTCCCTCCGCATCCGAGTCGTCGGCTCCCGCCGTTCCTCCGAAGCCCCGCAAATTTTATCAGTCGCTCTATTTCCAGGTCATCGTCGCGATCGTCCTGGGCGTGCTGCTGGGCCATTTCTTCCCCGCCACCGGCGAGGCGATGAAGCCTTTCGGCGAGGGCTTCATCAAGCTGATCAAGATGATCATCGCCCCGATCATCTTCTGCACCGTCGTCATCGGCATCGCGGGCATGGAGGACATGAAAAAGGTCGGCAAGACGGGTGGCCTCGCCATGCTGTATTTTGAAATCGTCAGTACGCTGGCCCTCGTCGTCGGTCTCGTCATCGTCAATATCGTGCGTCCCGGCGCGGGAATGAACATCGACGCCGCCAGCCTCGATACCAAGGCCATCGCGCAATTCACCGCCCCCGGCAAGATGGAGGGCACGGTCGATTACATCCTCCACATCATCCCGACCACGGTCTTTGACGCCTTTGCCAAGGGCGAGATCCTCCAGGTGCTGCTCGTGTCGGTGCTCTTCGGCTTCGCGCTGCATCGCTTCGGCGGGCGCAGCTCGATCGTCTTTGAGCTGATCGAGAAAACCTCGCATGTCCTCTTTGGCATCGTGGGTATCATCATGAAGGTCGCTCCGCTCGGCGCGTTCGGCGCGATGGCTTTCACCATCGGCAAGTACGGCACGGAGTCGCTCCTTTCGCTGGCGAAGCTCATGGGGTCGTTTTACCTCACGTGCCTCATCTTTATCTTCCTCGTGCTCGGCACCATCACGCGGCTGCACGGCTTCAGCGTCTGGCGCTTCATCAAGTACATCAAAGAGGAGCTCCTCATCGTGCTCGGCACCTCGTCGTCCGAGTCCGTGCTGCCCCGCATGATGACCAAGCTGGAGAATCTCGGCGTGAAGAAATCCACCGTCGGCCTCGTCATCCCGACCGGGTATTCCTTCAACCTCGACGGCACCGCGATCTACCTGACCATGGCCGCTGTGTTCATCGCCCAGGCCACGAATACCCCGCTCGATCTCACCCACCAGCTCACGCTCCTCGCCGTGCTGCTCCTCACCTCCAAGGGCGCGGCGGGCATCACGGGCAGCGGCTTCATCGTGCTGGCGGCGACGCTTTCCGCCGTGGGCCACGTGCCGGTGGCGGGCATCGCCCTCATCCTGGGTATCGATCGCTTCATGTCCGAGGCGCGCGCGCTGACGAACCTCGTCGGGAACGGCGTGGCCACCATCATCGTTGGCAAGTGGTGCAAAGAGGTCGATGAGACCCGGATGCGCCACGTCCTCGGCTCTGTTTCCCCCACCCCGGCTGCTGCCGCCCCGGCCGCCCTCCCCGCCGTCCAGGCGCCGGAGGAACGCCTGGTGGTTTCCCCCGTCAGCTAG
PROTEIN sequence
Length: 462
MNTPSASESSAPAVPPKPRKFYQSLYFQVIVAIVLGVLLGHFFPATGEAMKPFGEGFIKLIKMIIAPIIFCTVVIGIAGMEDMKKVGKTGGLAMLYFEIVSTLALVVGLVIVNIVRPGAGMNIDAASLDTKAIAQFTAPGKMEGTVDYILHIIPTTVFDAFAKGEILQVLLVSVLFGFALHRFGGRSSIVFELIEKTSHVLFGIVGIIMKVAPLGAFGAMAFTIGKYGTESLLSLAKLMGSFYLTCLIFIFLVLGTITRLHGFSVWRFIKYIKEELLIVLGTSSSESVLPRMMTKLENLGVKKSTVGLVIPTGYSFNLDGTAIYLTMAAVFIAQATNTPLDLTHQLTLLAVLLLTSKGAAGITGSGFIVLAATLSAVGHVPVAGIALILGIDRFMSEARALTNLVGNGVATIIVGKWCKEVDETRMRHVLGSVSPTPAAAAPAALPAVQAPEERLVVSPVS*