ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_71

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(72692..73111)

Top 3 Functional Annotations

Value Algorithm Source
N utilization substance protein B homolog n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6X5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 147.0
  • Bit_score: 147
  • Evalue 6.80e-33
NusB antitermination factor similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 129.0
  • Bit_score: 119
  • Evalue 4.30e-25
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 130.0
  • Bit_score: 173
  • Evalue 1.30e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 420
ATGGGTGTCCGACGTGAAGGCCGCGAAGCGGCTGTGCAATATCTCTATCTCCGCGAAGTCAACGGGGAGTGCGACCTTGAGAGCTTCTACAAATTTCGCGGGCTGAGTCCGGCGGCGCGCCGATTCACCGGTGAGCTCGTGGCTGGCACGATGAAAGAGCAGGAGGGCATCGACGAGACCATCCGCAAGAGCGCGCAGAACTACGAGCTCAACCGCATCTCCGCCGTCGATCGCAACATCCTCCGCGTGGCCATCTACGAGATGCTGCACTGCCCGGATACGCCGCCCGTGGTCTCCATCAACGAAGGTATCGAGATCGCGAAAAAATACAGCACCGAGGAATCGGGCCGCTTTGTGAATGGCGTGCTCGACCAGGTGCGCTCCAGCCTCGCTCGTCCCGCTCGTACAGCCGCGAACTGA
PROTEIN sequence
Length: 140
MGVRREGREAAVQYLYLREVNGECDLESFYKFRGLSPAARRFTGELVAGTMKEQEGIDETIRKSAQNYELNRISAVDRNILRVAIYEMLHCPDTPPVVSINEGIEIAKKYSTEESGRFVNGVLDQVRSSLARPARTAAN*