ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_72

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(73125..73577)

Top 3 Functional Annotations

Value Algorithm Source
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 145.0
  • Bit_score: 149
  • Evalue 2.10e-33
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6X6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 145.0
  • Bit_score: 149
  • Evalue 1.50e-33
6,7-dimethyl-8-ribityllumazine synthase similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 137.0
  • Bit_score: 127
  • Evalue 1.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 453
ATGGTGGGAAAAGCCACGTTTTCGTTTGCCCTGGTCGCCAGCCAGTACAACCAGGAGTACGTGCAGGGGCTGGTGACACACGCGCACCAGGAGCTCAACGAGCTCGAGCCCGGCTGCACCGCCACGCTGGTGTGGGCACCGGGGGCCTTTGAGATTCCCCTGCTGGCCAAGCTGGTGGCGGAAAAGAAGAAGTACAACGCCATCCTCGCTCTCGGGGTGGTGCTTCAGGGCGCCACGGCTCATGCCGACCTGATCGGCCGCACGGTGACGGACTCCCTCCAGAGAATTTCCCTCGAATATTCGGTACCCGTGATCAACGAGGTGCTCCTCCTCCAGAACGAAGAACAGGCGCGCCAGCGCTGCCTGGAACTCGAACTCAATCGCGGCATCGAAGCCGCGCGCGCCGCCGTCTCCTCGGCCCGCACAGTTCGCGAAATCGTCTCCAAACTTTAA
PROTEIN sequence
Length: 151
MVGKATFSFALVASQYNQEYVQGLVTHAHQELNELEPGCTATLVWAPGAFEIPLLAKLVAEKKKYNAILALGVVLQGATAHADLIGRTVTDSLQRISLEYSVPVINEVLLLQNEEQARQRCLELELNRGIEAARAAVSSARTVREIVSKL*