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berkeley_reactor_200306_planktonic_scaffold_59817_426

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 483517..485757

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002F4C814 similarity UNIREF
DB: UNIREF100
  • Identity: 32.2
  • Coverage: 740.0
  • Bit_score: 374
  • Evalue 1.40e-100
Mammalian cell entry protein {ECO:0000313|EMBL:KJK01237.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.4
  • Coverage: 757.0
  • Bit_score: 379
  • Evalue 8.10e-102
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 740.0
  • Bit_score: 368
  • Evalue 2.90e-99

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Taxonomy

Pseudomonas sp. 21 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2241
ATGAGCCAAGCACCCATCGACAAAGAAGACGCCGGAGAAATCGTCTCCACCCGCAGGACTTTCCCCTGGGCCTGGGTGTTTCCCATCATCGCCGCGGCCGCGACCGCCTGGCTGTTTTGGAACAACTATCGCGAGGAGGGACCGGAGATCGAAATCGCATTCCGCGAGGCTCCGGGCATCGAAGCCGGCAAGACGCCCCTCGTATTTCGCGGCGTGCACGCAGGCAAGGTCACCGGCGTGCATCTCGATCCCAATCTGAACGGCGTGATCGTGTCGGTGCGGCTCCGGGCTTTTGCCACCTCGCTCGCTCGTTCCAACACAGACTATTGGATCGAGAAGCCGGTCGTCTCGCTGCAACAGCTCACCGGCCTGGAAGCCATCATCCAGGGCAACTCGATCCGCGCCCGACAGCGCCAGGGCAATGGCAGCTATGAAACGCGCTTCAACGGGCTGACCAAGGCTCCGCTCTCTCCCCTCGATGCACCGACGCTTCTGATCAAGCTGCGCGCGGATTCCATACCAATGGTCGACCATGGCTCGCCGATCTACCACATGGGCGTGCCCGTCGGCTGGGTGGTGGAAAAGGAAATCGACACGGATGGCCGCCCATACCTTCAGGTCGTGATCGACGAGAATCACGCACAGATGGTGAACGATGCTTCGCGGTTTTGGCTGATCCCGGCCACCTCGGTGAAGGCGGGCCCCGGGGGACTCTCGCTCAACATCGCCGGGCTGGAGTCACTCATTCAGGGCGGCATCGCCTTCAATGATTTCGGCATCAAGGGCCAGCCGGTCGATGATGGGAAGGAATTCGAGCTCCAACCCGATGAGGCCAGCGCCCGGGCCTCGGGAAGAATGATCGCCATCACATTTGAGGACTCGCGCGGCATCGTGGCCGACCAGACGCGCATCATGTATCTCGGGCAACCCGTCGGCATCATCAGCAATCTGAATATTCCCTCCGGCTCCCCGACCGTCGTCGCATTGGCCAAGCTGGAGCCCGCGTATAATTTCCTCGCGGCAGAGGGGTCGCAGTTCACCCTCGTACGCCCCACGATCAACCTGGAGGGCGTCACCGGCCTCGACGCCATCCTCACCGGCCCGTACATCGAGTGCAAAGCGGGAACGGGCGGGCTGCAGGAACGATTCGCCGGCATCACCGTGGGCAACCCCGCCGCCCGCGAGAACGACCTGCTCGTGACCCTGACGGCCGACAGCCTGCCTGCGATCGAACCAGGAGCGCCCGTCTATTACCGCGGCCTCGTGGCTGGTGCGATCAAGGAGAAGACTCTCACCGCCAATGGCCAGCCCGCTCTCATCGCCGCGATCAAGCCGGATTTCCAGGCGGCGCTCGTGAGTTCCTCGCGCTTCTGGCGCACGCCTGCTACGGCGGCCATGGCCGGGCCGGGCGTGATCAATATTCACATCGAGGGTATTACCTCCCTCCTCAGCGGCGGCGTAAGCTTTGACAGTTTCGGCACGAACGGGTCACGCGTTCAGTCGGGGCAACGCTATCAACTCTTTGACGACGAAGCCTCGGCCCGCGCAACCTCCGCACCGATCCGCATCCGCTTCGCCAGCGCGCAAGGCATCCTGCCGGGCCGCACGGAACTCCGCTATCTCGGCGTGCGCGTCGGTTTGGTCGATGAAGTGCGCACGGACCGCGGCCGTGTCGAGGTAATCGCCCGCATCCAGCCGGGATATGAGGAACTGCGCCGCGAGGGATCGATCTTCTCCCTGGTGGAGCCGCAGATTTCCCTGCAAGGCATCTCCGGTCTCGAGACCATCATCAGCGGCGTGTATATTGACTGTATCCCCGGCTCCGGCGGTTATGGCAATGTCTTCTCCGGCCGCATGATCACTGATCCCTCCCTGGCCGAGGCCAGCGGCTTCACGATCAAGATCTCCACCCCGGCCACGACTGTCGGCCTCGGCGCACAGGTGCTGTACCGCGACGTGAAGGTGGGCGATGTCACGACCAAGACCCTATCACCCGACAACGATCGCGTCCTCCTGACCGTGGTGATCGATCCGAAGTACCGCGACCTCGTGCGCCAGAATTCCGTCTTCTGGAACGCCAGCGAACCCGAGGCCAAGATCGGCTTCCTCCGCCTGAAGGTCGACGCCCCGACTCTGGCCGGCATCGCGGGCCGCATCGCTTTCGGCAACCCCGACAAGCCCGGCCCCCCGGCCAAGCCGGGCCAGGTCTTCGAACTCGGCAAGCCGCTCCGCCAGAAGTAA
PROTEIN sequence
Length: 747
MSQAPIDKEDAGEIVSTRRTFPWAWVFPIIAAAATAWLFWNNYREEGPEIEIAFREAPGIEAGKTPLVFRGVHAGKVTGVHLDPNLNGVIVSVRLRAFATSLARSNTDYWIEKPVVSLQQLTGLEAIIQGNSIRARQRQGNGSYETRFNGLTKAPLSPLDAPTLLIKLRADSIPMVDHGSPIYHMGVPVGWVVEKEIDTDGRPYLQVVIDENHAQMVNDASRFWLIPATSVKAGPGGLSLNIAGLESLIQGGIAFNDFGIKGQPVDDGKEFELQPDEASARASGRMIAITFEDSRGIVADQTRIMYLGQPVGIISNLNIPSGSPTVVALAKLEPAYNFLAAEGSQFTLVRPTINLEGVTGLDAILTGPYIECKAGTGGLQERFAGITVGNPAARENDLLVTLTADSLPAIEPGAPVYYRGLVAGAIKEKTLTANGQPALIAAIKPDFQAALVSSSRFWRTPATAAMAGPGVINIHIEGITSLLSGGVSFDSFGTNGSRVQSGQRYQLFDDEASARATSAPIRIRFASAQGILPGRTELRYLGVRVGLVDEVRTDRGRVEVIARIQPGYEELRREGSIFSLVEPQISLQGISGLETIISGVYIDCIPGSGGYGNVFSGRMITDPSLAEASGFTIKISTPATTVGLGAQVLYRDVKVGDVTTKTLSPDNDRVLLTVVIDPKYRDLVRQNSVFWNASEPEAKIGFLRLKVDAPTLAGIAGRIAFGNPDKPGPPAKPGQVFELGKPLRQK*