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berkeley_reactor_200306_planktonic_scaffold_59817_427

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(485768..488158)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH59_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 523.0
  • Bit_score: 468
  • Evalue 1.30e-128
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 523.0
  • Bit_score: 468
  • Evalue 3.70e-129
PAS domain S-box {ECO:0000313|EMBL:AGA28190.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 523.0
  • Bit_score: 468
  • Evalue 1.80e-128

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2391
ATGCCGGGCACCCGATTCACGTCGTTCCGCGCACAAGGACTCCGGCTCATCGCCACGGCGGCGGGGCTTTTTGGCGTCCTCGGCGGTATTGTGACGCTCCTCGGCTGGGCGCTCGATCGTCCATGGATGACCGACTGGCTGCACAGCGGCATCAGCATGTTTCCCAATGCCGCCATCTGCGGCGCACTCATCGGGGTTTCCTTGATCGTTCTGGCCTGGAGCGGTCGGAGCAAGACCTTGCGAATCCTTTCGAGAGTGGTCGCGTTGTTCTGCGCCCTGCTCAGCGGATTGGTGCTCTATCAACACCTTACCGGAGCCAACCTGGGCATTGATACCGCGATCTTCGCCCGGGAATGGGGGCAGAAGGGGAGTGCCGCTCCGATGCGGATGGGCATCCCTGCCAGCGTCTCTTACCTGATCCTGGGAATCGCTGTTTTTCTCGCCTCCTGGAACGGATCTGCCCGGCGTGTTGCCTCCTTGCTGGCCTTGGGCACGGTCGCCGTTGTTTCGCTTTCCCTCATGGGATACTGGTTTGGTGCGGATCAGCTCTTCGGCATCGCGCATTACACGGCCATCGCCTTCCAGACAGGACTTATCATCTTCATCCTGAGTGCGGCCATCATCGCGGTGATCCCGGAGTACGGGCTGGCTGAGATGCTCCTGCGGGAGGATGCAGGAGGAGTTGCCGCCCGCCGCCTGCTGCTTCCGATCATCGTCATTCCGCCGGTCATCGGCTGGCTTCAGATCATCGGCCGCCACTATGGGATTTACGATGGGGCCTTTGGTACCGCCGTGCGGACGCTCTGCGAGACCGCGTTGTTTCTCTGGCTGCTCTGGTGGACAGTCAATACGATCAGCAGCCAGGCTTCCGCGGCCCGGCAGGCCCGGTCTGCCCTGCGTGTGCTGGACGAGAGATTCACCCGCTTCATGGAATCCGTTCCCGGTCTCGCCTGGATCAAGGATGCCGACGGCCGCTACGTCTTTGCCAACGAATCCGCCCTCAAGGCCTTCCGGTTATCCCGGACCGAACTCTATGGTCGCACGGATGCCGATGTATTTTCTCCCGAGACAGCGGCGACCTTCATGGCCAATGATCGCCGGGCGGCATTATCCGGATCCGGCATTCAGGTCATCGAAAAGCTGGAGCACGACGATGGAGAGCACCATTCCCTGGTGGCGAAATTTCCCATTGAAGAACCCGGCTCCAGGCAGCCGTTTGTGGGTGGCATCGCCATCGACATCACCGATCGCATCCGGGCTGAGGAAGCGCTGCGGCTTGCCGACCGGCGCAAGGATGAGTTCCTCGCCACCCTCGCGCATGAGCTGCGCAATCCGCTCGCGCCGATTCGCTACGCCGTGCAGCTCATTGCGCAGCCTGGGGTGGATCGTTCTACGCTGCAATACGTGCACGGCGTCATCGACCGTCAGGTCGGCCATATGGTGCGTCTGCTCGAGGATCTCCTCGATATGTCCCGCATCTCCTATGGCAAGCTGGAGCTGCGCAAGGAGCGCGTCGACTTGTCCGTCATCGTAAACTCCGCCCTCGAGGCCAGCCGCCCGATCATTGAGGCCGTCGGACATGAACTGGTCGTTGAGATGCCGGCAGAGCGCGTCGTGCTTGAAGCGGACCCGGTACGGCTCGCCCAGGTGTTTTCCAACCTGCTCAACAACGCTTCGAAGTTTACCACAGCCCGGGGACGCATCGTCTTTTCCGTACGTCGTGAAGACGGCGCGGTTTCGGTCTCTGTATCTGACAATGGCATCGGTCTTTCCCAGGAGTCGCTGCACACGATTTTCGACATGTTCTCCCAGGTGCATCGAGGCGGAGTTCAGTCCGGCCTCGGCATTGGCCTCGCGCTGGTCAAGGGACTCCTGGATCTCCACGGTGCCGCCATCGAGGCCGCGAGCGAAGGCCCGGGGCGGGGCAGCCGGTTCACGGTGCGTATTCCCTTGCCCAAGACCCCGCTTGAGATTGCTTCGCCCGATGCGCTGCCCGTGGTGCATGTTTCCCAGACCTTGAAGATCCTCGTTATCGACGACGTGCGAGACATCGCCGACAGCATCTCCAGCCTGCTGCGCAGCATGGGATACGATGCGCATACAGCCTACGGAGGCGATGAGGGGCTCGTCGAGGCGGAGGTGTTTCGCCCGGACGTCATCCTCCTCGACATCGGTATGCCGGGGCGGGATGGTCACCAGGTCTGCCGGGAAATACGCAAGCAGACCTGGGGTGGATCGATTTACATCATAGCGATCACCGGTTGGGGCCAGGAATCCGACCGCCGCCTTTCCCGCGAAGCCGGGTTCGACGAACATCTCGTCAAACCCGTCGATGTCTCAAAACTCGTCGACCTTATCGAGCAAGCCCGCGGCTCACGGGCCACGGGCTGA
PROTEIN sequence
Length: 797
MPGTRFTSFRAQGLRLIATAAGLFGVLGGIVTLLGWALDRPWMTDWLHSGISMFPNAAICGALIGVSLIVLAWSGRSKTLRILSRVVALFCALLSGLVLYQHLTGANLGIDTAIFAREWGQKGSAAPMRMGIPASVSYLILGIAVFLASWNGSARRVASLLALGTVAVVSLSLMGYWFGADQLFGIAHYTAIAFQTGLIIFILSAAIIAVIPEYGLAEMLLREDAGGVAARRLLLPIIVIPPVIGWLQIIGRHYGIYDGAFGTAVRTLCETALFLWLLWWTVNTISSQASAARQARSALRVLDERFTRFMESVPGLAWIKDADGRYVFANESALKAFRLSRTELYGRTDADVFSPETAATFMANDRRAALSGSGIQVIEKLEHDDGEHHSLVAKFPIEEPGSRQPFVGGIAIDITDRIRAEEALRLADRRKDEFLATLAHELRNPLAPIRYAVQLIAQPGVDRSTLQYVHGVIDRQVGHMVRLLEDLLDMSRISYGKLELRKERVDLSVIVNSALEASRPIIEAVGHELVVEMPAERVVLEADPVRLAQVFSNLLNNASKFTTARGRIVFSVRREDGAVSVSVSDNGIGLSQESLHTIFDMFSQVHRGGVQSGLGIGLALVKGLLDLHGAAIEAASEGPGRGSRFTVRIPLPKTPLEIASPDALPVVHVSQTLKILVIDDVRDIADSISSLLRSMGYDAHTAYGGDEGLVEAEVFRPDVILLDIGMPGRDGHQVCREIRKQTWGGSIYIIAITGWGQESDRRLSREAGFDEHLVKPVDVSKLVDLIEQARGSRATG*