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berkeley_reactor_200306_planktonic_scaffold_151594_284

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(289699..290577)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Zavarzinella formosa RepID=UPI0003177EE9 similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 292.0
  • Bit_score: 230
  • Evalue 1.70e-57
ABC transporter ATP binding protein similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 296.0
  • Bit_score: 194
  • Evalue 2.90e-47
Tax=RIFOXYA2_FULL_RIF01_40_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 293.0
  • Bit_score: 208
  • Evalue 9.60e-51

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Taxonomy

RIFOXYA2_FULL_RIF01_40_8_curated → RIF1 → Bacteria

Sequences

DNA sequence
Length: 879
ATGAACGACACCGCCATCTCCATACGCGACGTGACGCGATCGTACGGAAAGACCCCCGTGCTCGACCGTCTCGATCTCACCGTGAAGGCCGGGAGCATCTACGGCTTCCTGGGCCGCAACGGATCAGGCAAAACTACGACGATCAAGCTGCTGGCCGGATTGGGACGTCCGGAGACCGGCGAGATTTCCGTGCTGGGCAGGAACCCCTGGGAGTTCACGGCGGAGGACCGGCAGGGAGTCGGCTATCTTTCGGAAAAGCAGAACCTCCCGCCGCTCATGAAGGTAAAGAGCCTGCTCGATTTCTGCTCCCGGCTGTATCCGCAATGGGACCGGGAGTTTTGCGAGGGGCTCATCGCGCGCTTCCAGGTGCCGGTGAACAGGCGCATCAGTGCGCTATCGATGGGCAACCAGCGGCTGGTTGGCATCATCCTCGCCCTCGCGCCGAGGCCAGCCGTGGTGCTTCTCGATGAACCCGCCGCCAATCTCGATCCCGTGGCTCGACGCGAGTTTCTCGACGAAGTCCTCGACCTCATCCGCGATGGCGACCGCACCGTGTTCTTCTCCACCCACATCCTGAGCGATGTCGAGCGCGTGGCTGACGAGGTGGGCATTCTCGCCCAGGGAAAGCTGCGGGTGAGCGAGTCGCTCGACAGCCTGAAGGAGACGGTGAAGCGCGTGAGGTTCTTTGGTTTCCCCGGCAACGCACCGGAGCGTCCGCCGCAAGCATTCGGCTGGCGGGTGCGCGACGGAGAGGCGCTCGGAACCCTGAAGCTCTCCCATCCCGGCGAACCCGCCGCCCTGGCTGCCAGCTGGAAATGCCAATACGAAATCATCGACTTGTCCCTCGAGGACATCTTCGTCGACATCGCCCGCAACTGA
PROTEIN sequence
Length: 293
MNDTAISIRDVTRSYGKTPVLDRLDLTVKAGSIYGFLGRNGSGKTTTIKLLAGLGRPETGEISVLGRNPWEFTAEDRQGVGYLSEKQNLPPLMKVKSLLDFCSRLYPQWDREFCEGLIARFQVPVNRRISALSMGNQRLVGIILALAPRPAVVLLDEPAANLDPVARREFLDEVLDLIRDGDRTVFFSTHILSDVERVADEVGILAQGKLRVSESLDSLKETVKRVRFFGFPGNAPERPPQAFGWRVRDGEALGTLKLSHPGEPAALAASWKCQYEIIDLSLEDIFVDIARN*