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berkeley_reactor_200306_planktonic_scaffold_151594_285

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(290574..290975)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJV5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 119.0
  • Bit_score: 108
  • Evalue 3.40e-21
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG76413.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 119.0
  • Bit_score: 108
  • Evalue 4.70e-21
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 123.0
  • Bit_score: 104
  • Evalue 1.80e-20

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Taxonomy

Dethiobacter alkaliphilus → Dethiobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 402
ATGTTCATCGCGCTCCATTCCTCCAGCGGGGTGCCGCTTTATCTCCAGTTGCTCAATCAACTGAAGGAGCGCATTGCCAGCGGGCAGGTGAAACCGGGCGAGCAACTGCCCTCGGTGCGCGAGCTTTCCGCCGACCTGAAGATCAACCCGCTCACGGTCGCCAAGGTCTACCAGATCCTCGAGCGCGAAGGGCTGGTCGCGACGCGGCGCGGCATGGGGACATTTGTCGCGGAAAAGGTCGACACGCTTCCCCTCGCGGCTCGCCGCCAGGCGCTCGACCCCGCTGTGCGCCAGCTCGTGGCCGAGGCCATCCACCTGCGCCTCAGTGAGGCCGAGGTGGGGGAGCTCATCGCGCGTCATTTTCAGCAGATCAATCCCCGCAATTCCTCAAACCAACCATGA
PROTEIN sequence
Length: 134
MFIALHSSSGVPLYLQLLNQLKERIASGQVKPGEQLPSVRELSADLKINPLTVAKVYQILEREGLVATRRGMGTFVAEKVDTLPLAARRQALDPAVRQLVAEAIHLRLSEAEVGELIARHFQQINPRNSSNQP*