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berkeley_reactor_200306_planktonic_scaffold_333344_56

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(54229..55308)

Top 3 Functional Annotations

Value Algorithm Source
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXU6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 336.0
  • Bit_score: 231
  • Evalue 1.20e-57
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EDY21094.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 336.0
  • Bit_score: 231
  • Evalue 1.70e-57
amiC; N-acetylmuramoyl-L-alanine amidase similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 306.0
  • Bit_score: 215
  • Evalue 1.50e-53

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1080
ATGTTCGCCACGGAGGCCCGCGCCTTCGACTGGGACATCCAGCGTATTGACGGACGCGACTACGTGTCCGTGGCCAAGATCGCCGAGTTCTACAATCTTCCCCTCGATGTGGCTCCCAGCGACCGCCAGATGTATCTCTCGCGGGGCAGCCGCAGCCTCACCGCCCGGGCCGACAGCCGCGATCTCGACATCAACGGTGTACGCTACGTGCTCTCCTTCCCGGTGCTCGACCGCAACGGAAAGTTCTGGGTTTCGCGCATGGACTTGGGCAAGACGATCGAGCCCGCCTTCCGCCCGGAGAACGTCCAGGGGCTGAAGCCCTTCTCGCTCGTCGTCCTCGATCCTGGACACGGCGGCCAGGACAAGGGAGCTGCCAGTCCATATGAATTCGAGAAAAACTTCGCCCTAGACGTCGCCCGCCGGGTTCGCAATGAACTCCAGCAGGCCGGACTCCGCGTCTTCATGACGCGCAACAATGACAGCTTCGTGGAGCTACAGGACCGCGCCGCAATGGCCAATGCGAAGCAGAATTGCATCTTCGTCAGCATCCACTTCAACGCGACCGACACCAATCCCGACGCCAGCGGCCTTGAGATTTACTCCATCACCCCGCGCGGTTCGCCGTCGACCGAGTACGACACCCTGCTCGTCCGCGATATGGTGCAGGAGTATGGCAATGCCAACGAAGTCCAGAGCTTTGCTCTCTCACATACGATCTTTCACTCGCTCCGCGGAGCCGATCTCAACATGGCCGATCGCGGCGTAAAACGCGCCCGGTTTGCCGTCCTTCGCCTCACCAAGATGCCAGCCGTGCTAATCGAGGGCGGATTCCTCACCAACTCCGGCGACGCCAAGCGTGTTGCCTCCACGGCCTGGCGCAACCAATACGCCAAGGCGATCGCCCGGGGCATTCTTGCCTATCGTAAACTCGTCGAGACAGATCAGGCTCCGCCAACCATGGCAGACTATCGCAATGGCACAGCCAGCGTGAATAGCGCAGCCACTCCCCCACCGCGCCCGGTCGCCACCCCCGCACCCGCGCCGGTGAACTCGATCAATCTGCGCGACCTCCCGCAGTAA
PROTEIN sequence
Length: 360
MFATEARAFDWDIQRIDGRDYVSVAKIAEFYNLPLDVAPSDRQMYLSRGSRSLTARADSRDLDINGVRYVLSFPVLDRNGKFWVSRMDLGKTIEPAFRPENVQGLKPFSLVVLDPGHGGQDKGAASPYEFEKNFALDVARRVRNELQQAGLRVFMTRNNDSFVELQDRAAMANAKQNCIFVSIHFNATDTNPDASGLEIYSITPRGSPSTEYDTLLVRDMVQEYGNANEVQSFALSHTIFHSLRGADLNMADRGVKRARFAVLRLTKMPAVLIEGGFLTNSGDAKRVASTAWRNQYAKAIARGILAYRKLVETDQAPPTMADYRNGTASVNSAATPPPRPVATPAPAPVNSINLRDLPQ*