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berkeley_reactor_200306_planktonic_scaffold_333344_354

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(398784..399893)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, delta subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 363.0
  • Bit_score: 322
  • Evalue 3.20e-85
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDY19571.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 363.0
  • Bit_score: 322
  • Evalue 4.40e-85
DNA polymerase III subunit delta similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 355.0
  • Bit_score: 215
  • Evalue 2.00e-53

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1110
ATGCCCTCCAAGGCCTCACCCATCCATTTCATTACCGGCTCCGACGAGTCGGCCGTCAAGAAAGCTGCCTCGGCGCTCGTTCAGAAGCTCGCGCCCGGAGCCGACGCCTTCGGCCTGGAGACGATCGATGGCGCGGTCGATACCGTCGATGCCGCCGCCACGGCAATCCAGAGCACCATGCAGGCGCTGCTGACCATGCCTTTCCTGGCGGGAGCCAAGCTCGTGTGGCTGAAGAGCGCCACGTTTCTTTCCGATAGCGTAATGGGCCGTTCGGAAACCGTTGCCGACAATCTCGAGAGCCTTTCCAAGCTGCTCACTGAGGGGCTGCCCGATGGCATCACCTTTGTCTTTAGCGCGCCCCAGCCCGATAAACGGCGGGGCATTTACAAGACCCTCACCAAGCTCGCCCAGACTACCGTGCATGACCTGCCGGACCTCGGTTTCAACGCTGGCGAGGAGGAGATGATCGAGTGGACGACATCGCGCGTGCACGCCCGTGATCTCCAGATGAGCCCGGCGGCTATAGAAGCGCTCACCGCTCGCGTTGGCCTCGATACCCGCCAGCTCGATACGGAACTGGAGAAGCTGGAAACCGCCTTCGGGAAAAGCCGGGCCATTGAAGCCGAAGACATCCGCGATCTGGTTCCGCAGACCCGCGAGGGCGGCATCTTTGACCTAAGCGAGGCGGTTTCCCGTCGTGACCTGCCGCTGGCTCTCGACACTCTCGCCCAGCTTTTCCGCCAGGGAGAAAAAGGCGTCGGCATCCTGCTCGCTTCCATCGTCCCGACAGTGCGCAACCTCCTGCTGGCCAAGGATCTCATCACTCGTCACAAGGTTCCCCCGCCGTCGCAGCCGCATTTCTTCGCATCATCGCTCAAGCGCCTCCCGGAAAGCGCCCTTTCGCACCTGCCCAAGAAAAAGGACGGCACGCTCAATGCCTACCCGCTCGGCATCGCCGCGATGAATGCCTCTCACTACACTCTGCCGGAACTCGAGACAGGCTTCGCTGCCTGCGCCGAGGCGAACCAGCGACTGCTCAGCGGGAGCCTGAATGACGAGACAATCATCACCCGGCTTTTGATCGGGCTGATGGCTCGCAAGGCTCACTAG
PROTEIN sequence
Length: 370
MPSKASPIHFITGSDESAVKKAASALVQKLAPGADAFGLETIDGAVDTVDAAATAIQSTMQALLTMPFLAGAKLVWLKSATFLSDSVMGRSETVADNLESLSKLLTEGLPDGITFVFSAPQPDKRRGIYKTLTKLAQTTVHDLPDLGFNAGEEEMIEWTTSRVHARDLQMSPAAIEALTARVGLDTRQLDTELEKLETAFGKSRAIEAEDIRDLVPQTREGGIFDLSEAVSRRDLPLALDTLAQLFRQGEKGVGILLASIVPTVRNLLLAKDLITRHKVPPPSQPHFFASSLKRLPESALSHLPKKKDGTLNAYPLGIAAMNASHYTLPELETGFAACAEANQRLLSGSLNDETIITRLLIGLMARKAH*