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berkeley_reactor_200306_planktonic_scaffold_333344_355

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(399894..402074)

Top 3 Functional Annotations

Value Algorithm Source
UvrABC system protein B n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 733.0
  • Bit_score: 1098
  • Evalue 0.0
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 733.0
  • Bit_score: 1098
  • Evalue 0.0
excinuclease ABC subunit B similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 721.0
  • Bit_score: 834
  • Evalue 1.40e-239

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2181
ATGGCTTTTGAGCTCGCCTCGAACTATGAACCCCGCGGAGATCAGGGACAGGCGATCGACAAACTGCTCCGCTCGCTCCAGGCGGGCAACCGCCACCAGACGCTGCTCGGCGTAACCGGCTCGGGAAAAACCTTTACCGCCGCCAATGTCATCAAGGAACTGGACCGCCCCACCCTCGTCATGTCGCATAACAAGACGCTGGCGGCGCAGCTTTACAGCGAGTTCAAGCAGTTCTTCCCGCGCAACGCGGTCGAGTATTTCGTCAGCTACTTCGACTACTACCAGCCCGAGGCGTACATCCCGCGCACGGACACCTACATCGAGAAGGACAGCTCGATCAACGAAGAGATCGAACGCCTGCGCCTCTCTGCGGTAAGCTCCCTCCTCTCCCGCCGCGACACCATCGTGGTAGCCAGTGTCTCGTGCATCTACGGCCTGGCCTCGCCGGAGGACTTTCTCCAGATGCTCGTCACGATCAAGACCGGGCAGACCATGACGCGCGAGGCCTTCTTGGCCAAGCTGGTCGACATGCTCTACGAGCGCAACGACATCGCCTTCGGCCGTGGCAAATTCCGCGTGCGCGGCGATGTGGTCGAGGTGCATCAGGCCCAGGTGGACGACGAGGCGATACGGGTCGAGTTCTTTGGCGACGAGATCGACCGGATTTCGCAATTTGATCCCCTCACCGGCAATGTCACGGCGACACTGACGACGCTGACGATTTATCCGGCCAAACAGTTCGTCACCCCCTACGACAAGCTCCAGCGTGCCGCCCGGGCCATCCGGGAGGAACTCGACCAGCGGGTGATGGAGTTCGAGCGGGACAACAAGCTCATCGAGGCCCAGCGCATCAAGCAGCGGACGGAGTTTGACCTCGAGATGATGCAGGAAATGGGATTCTGCAATGGCATCGAGAACTACTCGCGCCACCTCACCGGCCGTCCGCCAGGGTCGCGCCCCTACACGCTGATGGATTTCATGCCGAAGGACTTCCTGCTCGTCATCGACGAATCGCACGCCACCGTGCCCCAGATCGGCGGCATGTTTGCAGGAGATCGCTCGCGCAAATCCGTGCTGGTCAACTACGGATTCCGCCTCCCGAGCGCGCTCGACAACCGGCCGCTGAATTTTCCCGAGTTCATGGAAATGACCAATCAGGCGATCTATGTCAGCGCGACGCCGGGAGAATTTGAAATCCGCAACAGCATCGTCGGCAACACAAGCTATCTGGCCAATGCGGAGGGGTTCAAGGAGCAGAAATCCGCCGCCCGCCTGAGCGGTAAAAAATCGCGCTCGGGCAAGGCCGGGGAAGAGACCTTCGACCCGATCACGCCGGGATCGCCGCTCATCGTCGAGCAGATCATCCGCCCAACCGGCCTCATCGATCCGAAGATCACGATCAAGCCGCTGAAAGGCCAGATCGATGCGACCATCGAGCTTTGCCGCCAGCGCATCGACATCGGCGAGCGCGTCCTCGTCACCACGCTAACCAAGCGCACCGCCGAGGACCTCGCAGATTATCTGCGCGATATCGGCCTGAAAGTCCGCTACCTCCATAGCGACATCGACACCATCGAGCGCGTGGAAATCCTGCGCGGTCTCCGCGCCGGAGAATGCGACATCCTGGTCGGCATCAACCTCCTCCGCGAAGGTCTCGACCTTCCCGAGGTGAGCCTCGTCTGCATCCTCGACGCGGACAAAGAGGGCTACCTGCGCAGCCAGACCAGCCTCATACAGACGGCAGGCCGCGCCGCGCGTCACGTCAATGGCGAGGTCGTCCTCTTCGCGGATCAGGTCACAGGCAGCATGCAGGCCCTCATCGATGTGACGGAATACCGCCGCGCCCGGCAGATCGCTTACAACGAAGAGCATGGCATCACACCCACAAGCGTGAAACGCGCGGTGCAGGAGAGCCTCCATGTCATCCTGAAGGGTCGCGAACTCGAGCAGGGCATCGTGAAGGAAACCCCGGCTGACTTTGACCTCCACGAGGTCATTCGTGAACTTGAACAGGAAATGGCCGCCGCCGCTGCGTCACTGGAGTACGAAAAGGCTGCTTTGCTGCGAGATCAAATTCTGGAGTTGAAAAATGGGTCCGGGGTTTCAAAGATTGAGCCACGCCAGCGCCCGTCGAAATATCCGGCGAAGCGCGGCGGACGAAAAAAAGCCGGCTCGTTTTAA
PROTEIN sequence
Length: 727
MAFELASNYEPRGDQGQAIDKLLRSLQAGNRHQTLLGVTGSGKTFTAANVIKELDRPTLVMSHNKTLAAQLYSEFKQFFPRNAVEYFVSYFDYYQPEAYIPRTDTYIEKDSSINEEIERLRLSAVSSLLSRRDTIVVASVSCIYGLASPEDFLQMLVTIKTGQTMTREAFLAKLVDMLYERNDIAFGRGKFRVRGDVVEVHQAQVDDEAIRVEFFGDEIDRISQFDPLTGNVTATLTTLTIYPAKQFVTPYDKLQRAARAIREELDQRVMEFERDNKLIEAQRIKQRTEFDLEMMQEMGFCNGIENYSRHLTGRPPGSRPYTLMDFMPKDFLLVIDESHATVPQIGGMFAGDRSRKSVLVNYGFRLPSALDNRPLNFPEFMEMTNQAIYVSATPGEFEIRNSIVGNTSYLANAEGFKEQKSAARLSGKKSRSGKAGEETFDPITPGSPLIVEQIIRPTGLIDPKITIKPLKGQIDATIELCRQRIDIGERVLVTTLTKRTAEDLADYLRDIGLKVRYLHSDIDTIERVEILRGLRAGECDILVGINLLREGLDLPEVSLVCILDADKEGYLRSQTSLIQTAGRAARHVNGEVVLFADQVTGSMQALIDVTEYRRARQIAYNEEHGITPTSVKRAVQESLHVILKGRELEQGIVKETPADFDLHEVIRELEQEMAAAAASLEYEKAALLRDQILELKNGSGVSKIEPRQRPSKYPAKRGGRKKAGSF*