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BD02T64_Gammaproteobacteria_43_32_partial

BD02T64_Gammaproteobacteria_43_32
In projects: BD02T64

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: BD02T64_UNK

Properties

Avg. coverage: 31.56 Longest contig: 143.32 Kbp Bin length: 5.49 Mbp GC content: 42.91 %
Contigs count: 205 Features count: 4776 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 24 / 55 MC: 2 BSCG 26 / 51 MC: 3 ASCG 11 / 38 MC: 2
Displaying items 51-100 of 205 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
BD02T64_scaffold_875
Class: Gammaproteobacteria (68.57%)
35 40119 bp 43.03 32.13 91.85
BD02T64_scaffold_3097
Class: Gammaproteobacteria (50%)
14 14705 bp 41.96 32.61 91.74
BD02T64_scaffold_2346
Class: Gammaproteobacteria (86.96%)
23 27401 bp 45.30 31.53 91.72
BD02T64_scaffold_1268
Class: Gammaproteobacteria (85.71%)
14 30816 bp 43.58 30.23 91.70
BD02T64_scaffold_620
Class: Gammaproteobacteria (76.74%)
43 56273 bp 42.88 32.46 91.69
BD02T64_scaffold_906
Class: Gammaproteobacteria (70.83%)
48 58346 bp 41.65 34.21 91.68
BD02T64_scaffold_1889
Class: Gammaproteobacteria (84.21%)
19 22542 bp 42.98 33.16 91.34
BD02T64_scaffold_7280
Class: Gammaproteobacteria (66.67%)
3 6038 bp 44.67 33.44 91.32
BD02T64_scaffold_3879
Class: Gammaproteobacteria (93.33%)
15 16787 bp 45.77 28.62 91.30
BD02T64_scaffold_3760
Class: Gammaproteobacteria (90%)
20 23250 bp 44.83 31.36 91.29
BD02T64_scaffold_10963
Class: Gammaproteobacteria (50%)
4 3866 bp 42.58 30.73 91.26
BD02T64_scaffold_5307
Class: Gammaproteobacteria (83.33%)
12 12887 bp 43.04 30.53 91.25
BD02T64_scaffold_856
Class: Gammaproteobacteria (79.17%)
48 57214 bp 42.67 32.02 91.25
BD02T64_scaffold_365
Class: Gammaproteobacteria (87.1%)
62 67434 bp 43.07 32.30 91.13
BD02T64_scaffold_12317
Species: Thalassomonas actiniarum (50%)
4 3397 bp 41.30 30.07 91.05
BD02T64_scaffold_1486
Class: Gammaproteobacteria (56.52%)
23 27258 bp 42.19 32.63 90.98
BD02T64_scaffold_273
Class: Gammaproteobacteria (66.98%)
106 143319 bp 42.94 31.35 90.95
BD02T64_scaffold_956
Class: Gammaproteobacteria (74.19%)
31 42405 bp 43.49 31.49 90.85
BD02T64_scaffold_1701
Class: Gammaproteobacteria (76.19%)
21 24564 bp 42.63 32.57 90.79
BD02T64_scaffold_1061
Class: Gammaproteobacteria (53.85%)
39 42253 bp 41.48 32.66 90.70
BD02T64_scaffold_1391
Class: Gammaproteobacteria (91.67%)
24 28607 bp 43.96 31.80 90.63
BD02T64_scaffold_18393
Class: Gammaproteobacteria (66.67%)
3 2195 bp 45.47 26.99 90.62
BD02T64_scaffold_1158
Class: Gammaproteobacteria (91.89%)
37 40954 bp 44.04 31.25 90.60
BD02T64_scaffold_7936
Class: Gammaproteobacteria (80%)
5 5474 bp 42.56 36.39 90.54
BD02T64_scaffold_882
Class: Gammaproteobacteria (74.36%)
39 39903 bp 43.62 32.63 90.48
BD02T64_scaffold_6520
Class: Gammaproteobacteria (70%)
10 6834 bp 43.77 32.07 90.39
BD02T64_scaffold_5496
Class: Gammaproteobacteria (94.12%)
17 12475 bp 43.64 29.43 90.32
BD02T64_scaffold_4462
Class: Gammaproteobacteria (87.5%)
8 10181 bp 42.58 33.71 90.32
BD02T64_scaffold_622
Class: Gammaproteobacteria (61.54%)
26 49135 bp 44.26 27.56 90.31
BD02T64_scaffold_421
Class: Gammaproteobacteria (58.49%)
53 82076 bp 43.53 29.40 90.08
BD02T64_scaffold_8627
Class: Gammaproteobacteria (80%)
5 7120 bp 42.44 32.84 90.04
BD02T64_scaffold_305
Class: Gammaproteobacteria (79.69%)
64 76564 bp 42.88 31.83 89.99
BD02T64_scaffold_3125
Class: Gammaproteobacteria (90.48%)
21 26582 bp 41.53 32.40 89.95
BD02T64_scaffold_1331
Class: Gammaproteobacteria (82.14%)
28 29729 bp 42.42 34.11 89.93
BD02T64_scaffold_366
Class: Gammaproteobacteria (96.67%)
60 67327 bp 43.38 32.46 89.92
BD02T64_scaffold_1212
Class: Gammaproteobacteria (69.23%)
26 34021 bp 42.82 31.79 89.92
BD02T64_scaffold_1169
Class: Gammaproteobacteria (61.11%)
36 42445 bp 41.35 32.09 89.74
BD02T64_scaffold_236
Class: Gammaproteobacteria (72.5%)
120 124710 bp 42.93 32.01 89.68
BD02T64_scaffold_1111
Class: Gammaproteobacteria (84.06%)
69 72558 bp 42.94 32.33 89.67
BD02T64_scaffold_746
Class: Gammaproteobacteria (70.73%)
41 43674 bp 43.52 31.80 89.64
BD02T64_scaffold_1529
Class: Gammaproteobacteria (72%)
25 26885 bp 42.73 32.06 89.49
BD02T64_scaffold_1698
Class: Gammaproteobacteria (70%)
20 26835 bp 41.21 31.87 89.41
BD02T64_scaffold_953
Class: Gammaproteobacteria (74.42%)
43 44267 bp 40.74 34.41 89.38
BD02T64_scaffold_4744
Class: Gammaproteobacteria (62.5%)
8 9511 bp 42.42 32.65 89.36
BD02T64_scaffold_2163
Class: Gammaproteobacteria (70.59%)
34 37211 bp 43.52 30.84 89.30
BD02T64_scaffold_3547
Class: Gammaproteobacteria (90%)
30 23878 bp 43.73 32.81 89.30
BD02T64_scaffold_1330
Class: Gammaproteobacteria (62.5%)
24 29746 bp 42.21 33.34 89.29
BD02T64_scaffold_1583
Class: Gammaproteobacteria (61.54%)
26 25861 bp 42.37 31.22 89.16
BD02T64_scaffold_484
Class: Gammaproteobacteria (77.05%)
61 76059 bp 42.77 32.84 89.10
BD02T64_scaffold_5859
Class: Gammaproteobacteria (87.5%)
8 7652 bp 44.17 30.07 89.04
Displaying items 51-100 of 205 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.