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CN-SCN_Erythrobacter_14x

CN-SCN_Sphingomonadales_62_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Sphingomonadales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.72 Longest contig: 128.95 Kbp Bin length: 2.80 Mbp GC content: 61.96 %
Contigs count: 136 Features count: 2751 rRNAs count: 0 tRNAs count: 36

Genome completeness

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1

Description

Partial 38

Displaying items 1-50 of 136 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_16442 ERY14_104
Genus: Erythrobacter (50%)
6 5524 bp 62.55 17.27 92.38
cn_combo_scaffold_5707 ERY14_77
Species: BJP_IG2102_Porphyrobacter_62_18 (83.33%)
12 10454 bp 64.72 15.46 89.42
cn_combo_scaffold_2078 ERY14_27
Order: Sphingomonadales (89.29%)
28 26336 bp 62.19 15.06 89.09
cn_combo_scaffold_4393 ERY14_60
Order: Sphingomonadales (95%)
20 20410 bp 62.47 14.85 89.37
cn_combo_scaffold_3067 ERY14_44
Order: Sphingomonadales (97.56%)
41 33311 bp 62.06 14.68 89.85
cn_combo_scaffold_8940 ERY14_92
Species: BJP_IG2102_Porphyrobacter_62_18 (57.14%)
7 7041 bp 61.98 14.61 95.65
cn_combo_scaffold_3253 ERY14_49
Order: Sphingomonadales (92.86%)
14 17583 bp 60.76 14.60 92.70
cn_combo_scaffold_2265 ERY14_30
Order: Sphingomonadales (84.62%)
26 24127 bp 61.85 14.56 87.61
cn_combo_scaffold_1901 ERY14_23
Order: Sphingomonadales (100%)
21 28521 bp 62.09 14.54 93.90
cn_combo_scaffold_5020 ERY14_128
Order: Sphingomonadales (87.5%)
8 11726 bp 63.37 14.54 96.27
cn_combo_scaffold_810 ERY14_3
Order: Sphingomonadales (89.09%)
55 56456 bp 63.45 14.53 91.08
cn_combo_scaffold_2822 ERY14_41
Species: BJP_IG2102_Porphyrobacter_62_18 (60%)
30 32697 bp 62.43 14.52 91.20
cn_combo_scaffold_4353 ERY14_59
Order: Sphingomonadales (93.33%)
15 13446 bp 60.93 14.50 92.24
cn_combo_scaffold_4732 ERY14_66
Order: Sphingomonadales (100%)
12 12410 bp 63.31 14.50 91.43
cn_combo_scaffold_8629 ERY14_91
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
10 8834 bp 63.50 14.39 91.73
cn_combo_scaffold_3234 ERY14_48
Order: Sphingomonadales (81.82%)
22 17676 bp 61.76 14.38 87.79
cn_combo_scaffold_2726 ERY14_39
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (77.78%)
18 20535 bp 61.41 14.37 93.65
cn_combo_scaffold_1592 ERY14_16
Order: Sphingomonadales (93.94%)
33 32665 bp 62.27 14.27 90.90
cn_combo_scaffold_1211 ERY14_9
Order: Sphingomonadales (100%)
49 41216 bp 62.89 14.26 90.17
cn_combo_scaffold_2399 ERY14_33
Order: Sphingomonadales (100%)
27 22903 bp 63.18 14.26 92.08
cn_combo_scaffold_1664 ERY14_19
Order: Sphingomonadales (92.31%)
26 31670 bp 63.08 14.24 93.30
cn_combo_scaffold_3467 ERY14_51
Order: Sphingomonadales (88.57%)
35 31976 bp 62.73 14.23 90.88
cn_combo_scaffold_3727 ERY14_53
Order: Sphingomonadales (100%)
22 26986 bp 61.61 14.20 89.28
cn_combo_scaffold_1967 ERY14_119
Species: Erythrobacter sp. JL475 (54.55%)
44 39319 bp 61.42 14.20 94.54
cn_combo_scaffold_4454 ERY14_63
Order: Sphingomonadales (92.31%)
13 13183 bp 61.38 14.19 93.12
cn_combo_scaffold_18726 ERY14_105
Species: BJP_IG2102_Porphyrobacter_62_18 (75%)
4 5920 bp 66.20 14.19 86.60
cn_combo_scaffold_1321 ERY14_11
Order: Sphingomonadales (97.22%)
36 38683 bp 63.12 14.14 90.19
cn_combo_scaffold_1424 ERY14_13
Order: Sphingomonadales (95.16%)
62 60962 bp 62.61 14.14 89.61
cn_combo_scaffold_2665 ERY14_38
Order: Sphingomonadales (97.06%)
34 36743 bp 61.84 14.13 88.87
cn_combo_scaffold_7209 ERY14_84
Order: Sphingomonadales (100%)
9 8495 bp 64.94 14.13 90.94
cn_combo_scaffold_8386 ERY14_89
Species: Erythrobacter sp. NAP1 (50%)
4 7443 bp 62.89 14.12 91.98
cn_combo_scaffold_12273 ERY14_101
Species: BJP_IG2102_Porphyrobacter_62_18 (81.82%)
11 5210 bp 61.21 14.11 89.83
cn_combo_scaffold_3160 ERY14_46
Order: Sphingomonadales (83.33%)
18 18064 bp 61.60 14.10 94.30
cn_combo_scaffold_6471 ERY14_113
Order: Sphingomonadales (54.55%)
11 9348 bp 61.92 14.09 82.61
cn_combo_scaffold_2551 ERY14_123
Order: Sphingomonadales (80%)
20 21779 bp 59.16 14.08 90.25
cn_combo_scaffold_858 ERY14_5
Order: Sphingomonadales (96.55%)
58 54444 bp 62.77 14.05 92.07
cn_combo_scaffold_9827 ERY14_93
Species: BJP_IG2102_Porphyrobacter_62_18 (66.67%)
9 6428 bp 60.73 14.05 97.87
cn_combo_scaffold_5247 ERY14_73
Genus: Erythrobacter (69.23%)
13 11251 bp 62.43 14.04 94.42
cn_combo_scaffold_5447 ERY14_74
Order: Sphingomonadales (100%)
11 10904 bp 62.86 14.03 97.64
cn_combo_scaffold_2637 ERY14_124
Order: Sphingomonadales (86.96%)
23 21193 bp 61.61 14.02 87.45
cn_combo_scaffold_2888 ERY14_125
Order: Sphingomonadales (84.62%)
26 28024 bp 61.81 14.00 88.69
cn_combo_scaffold_2046 ERY14_120
Order: Sphingomonadales (69.23%)
26 30416 bp 64.01 13.99 96.92
cn_combo_scaffold_1603 ERY14_18
Order: Sphingomonadales (93.1%)
29 32491 bp 61.65 13.96 92.86
cn_combo_scaffold_1171 ERY14_8
Order: Sphingomonadales (97.62%)
42 42175 bp 61.79 13.95 91.08
cn_combo_scaffold_5475 ERY14_76
Order: Sphingomonadales (66.67%)
12 17355 bp 60.71 13.94 84.44
cn_combo_scaffold_4969 ERY14_71
Order: Sphingomonadales (84.62%)
13 11821 bp 61.38 13.90 87.76
cn_combo_scaffold_4909 ERY14_68
Order: Sphingomonadales (92.31%)
13 11977 bp 62.54 13.89 89.21
cn_combo_scaffold_3177 ERY14_47
Genus: Erythrobacter (52.94%)
17 17951 bp 62.63 13.88 95.73
cn_combo_scaffold_2532 ERY14_122
Order: Sphingomonadales (84.21%)
19 21918 bp 62.92 13.82 91.77
cn_combo_scaffold_8081 ERY14_87
Order: Sphingomonadales (100%)
7 7692 bp 62.04 13.81 93.95
Displaying items 1-50 of 136 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.